Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0877 ATGGAGTCACATTTTAGGGTTTTTCTTTCTTCAATAAATAAGCAGATTGGTGAAGTTGTTGCTTTAAAAAAGATGAAAAGAAAATATTATTCTTGGGAAGAATGTTTAAATCTGAAAGAAGTCAAGTCATTGAGAAAGATGAACCACCCAAACATTGTGAAACTCAAGGAAGTCTTTAGGAAAAATGATATTTTGTACTTTGTGTCTTGCTTACATGCACAGGCTTCCATGAATATATATGTCATTAAGAACTATATCCTCGTTTGA 267 0.3146 MESHFRVFLSSINKQIGEVVALKKMKRKYYSWEECLNLKEVKSLRKMNHPNIVKLKEVFRKNDILYFVSCLHAQASMNIYVIKNYILV* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0877 88 Gene3D Phosphorylase Kinase; domain 1 3 85 - -
Vvi13g0877 88 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 69 - -
Vvi13g0877 88 ProSiteProfiles Protein kinase domain profile. 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi13g0877 88 Pfam Protein kinase domain 10 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi13g0877 88 FunFam Uncharacterized protein 3 85 - -
Vvi13g0877 88 SUPERFAMILY Protein kinase-like (PK-like) 12 71 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0877 Vvi-Chr13 10810176 10813783 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Vvi13g0877 Pkinase 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0877 K08829 - vvi:104882706 112.464