Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0844 ATGGAGAAGTTGATATTTTCCTTATTTCTGGCGCTACCTTTAATTTTTACAGAAGCTCATGTTCCCGGTGGAGGGTTCACCAAGCTTTTCGATTTCGGGGACTCGTATGTCGACACTGGCAACGGCGGGAGGCAAGCTACTTCGTGGAAGAAACCATATGGGATCATTTTTCCTGGGAAGCCGACTGGCCGCTACTCAGACGGCCGTGTCTTCACTGATTACATAGCTTCATGGATGGGTATACGGTCTCCCATTCCTTACCGATGGAGAAAAATGGGCAAAAAAGTGCAAGGACATGGAATGAATTTTGCGTATGGAGGGACCGGCGTCTTTGACACACTGGTCAAGGCGCCAAACATGACTACTCAAATCAACCTTTTTCAACAGGTCCTTGAGGAGAAACTCCATACCAAACGAGACCTTAAGTCATCCATTGCTCTGGTATCCTTGGCTGGCAATGATTATGCTGCATACCTTGCTGGAAATGGCACCATCCAGAGTTTGCCAGCATTCACCACATCTCTTATTAGACAGCTTAGCTTGAATATGAAACATATTCATGGCATGGGAGTGCGAAAAGTGGCAATAATGGCGATACAGCCTCTGGGATGTTTGCCTCAAGTATCTGCCTTAACTTCCTATCCGAACTGCAGTGTAACTGGGAACTCAATCTCAAAGTTTCACAACCAAATACTGGAGAAATCAGTGCAGAAGTTGAACAAGGAAACCAAGGATTCTGTGTATATAAAAGTGGATATCTATAGCGCTTTTACGGCTGCAATGAAGAGTCAAGAACACCATCCAGGGACTTCAAAGTTTAAGGATCCACTGAAGCAGTGTTGTAGAGGTGTAAACAGTGCATACTCGTGCGGTGATGTAGACAAGAATGGGGCTTACAAATACGTTGTCTGCAAGAAACCCAATTCAGCATTCTTTTGGGATAGTGTGCACCCTACACAAGCAGGTTGGGATGCAGTTTTCTCAGCTTTAAAATCTTCCCTCCACATCCTTTTGGGATGA 1020 0.451 MEKLIFSLFLALPLIFTEAHVPGGGFTKLFDFGDSYVDTGNGGRQATSWKKPYGIIFPGKPTGRYSDGRVFTDYIASWMGIRSPIPYRWRKMGKKVQGHGMNFAYGGTGVFDTLVKAPNMTTQINLFQQVLEEKLHTKRDLKSSIALVSLAGNDYAAYLAGNGTIQSLPAFTTSLIRQLSLNMKHIHGMGVRKVAIMAIQPLGCLPQVSALTSYPNCSVTGNSISKFHNQILEKSVQKLNKETKDSVYIKVDIYSAFTAAMKSQEHHPGTSKFKDPLKQCCRGVNSAYSCGDVDKNGAYKYVVCKKPNSAFFWDSVHPTQAGWDAVFSALKSSLHILLG* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0844 339 CDD SGNH_plant_lipase_like 29 330 IPR035669 -
Vvi13g0844 339 PANTHER OSJNBB0059K02.9 PROTEIN 18 336 - -
Vvi13g0844 339 Pfam GDSL-like Lipase/Acylhydrolase 32 329 IPR001087 GO:0016788
Vvi13g0844 339 SUPERFAMILY SGNH hydrolase 31 333 - -
Vvi13g0844 339 Gene3D SGNH hydrolase 22 336 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0844 Vvi-Chr13 10064541 10068343 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0844 5 326 Pollen Coat Proteome AT1G75930 27.697 8.80e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0844 - - vvi:100258446 696.427