Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0835 ATGGACAACCAACCCCACTTCATCTGGCTTTTTCTCTTGCTTTCCGTTATAACAACTGCTGCAGGGGCTTATGCACATGCTAATAGCTTCACCAAACTTTTTGTGTTTGGGGACTCGTATGTTGATACCGGGAATAGGAATTTCACAGCTAGTTCATGGAACGAACCTTATGGAATTACTTATCCTGGTAGACCTGCTGGTCACTTCTCTGACGGCCATGTCTTCAGTGAATACATTGCTTCATGGATGGGCATAAAGTCTCCTACACCATATAGATTTAGAAAACTAAGACCCACAAAATATGGAATGAATTTTGCTTATGGAGGGACAGGCGTCTTCGACACACTGGTTGCTGCACCAAACATGACAATACAAATCGGTCTTTTTGAACAACTCCTTGAAGAGAAAATCTATACCGAAGATGACCTTAAGTCTTCCATTGCTCTGGTATCTGTTTCTGGCAATGATTATAATGCCTACATTGCTAGAGGTGGAAGTCTTCTGGGTTTGCCAGCCTTTATTGTATCTGTTGTTAAGCAGCTTGGCTTGGATCTACAACGTATTCATGATTTGGGAGTGCCAAAAGTAGTCGTTATGGGAATACAGCCTCTTGGATGTTTGCCTCAATTTACAAAGGAATATTCGTACGAGAAATGTAATGAAACAGGAAACTTGGCTTCACTGTTTCACAACCTATTACTAACTGCTGTGGTAGAGGAGCTGAAGCTGGAGAATGGTGAACCTGAATTTGTGATGCTTGATATGTACAATGCATTCATGTCTGCAATGAAGAAACATGAAGACGAAACAGGAACTTCAGAGTTGAAGGATACATTGAGGCCATGTTGCGCAGGTATAACAAGCGAAGACTCATGTGGGGACGTAGAGAATGGGGAGAAGAAATACAATGTATGCATTGATCCCAAGATGGCATTCTTTTGGGATTCGTTTCACCCTACACAAGCGGGCTGGCATGCAATTTACTCGGTTCTAAAATCTTCTATCGCAAACCTCTTCCAGACAGAGTTGTGGGGAAGTTTTTAA 1044 0.4205 MDNQPHFIWLFLLLSVITTAAGAYAHANSFTKLFVFGDSYVDTGNRNFTASSWNEPYGITYPGRPAGHFSDGHVFSEYIASWMGIKSPTPYRFRKLRPTKYGMNFAYGGTGVFDTLVAAPNMTIQIGLFEQLLEEKIYTEDDLKSSIALVSVSGNDYNAYIARGGSLLGLPAFIVSVVKQLGLDLQRIHDLGVPKVVVMGIQPLGCLPQFTKEYSYEKCNETGNLASLFHNLLLTAVVEELKLENGEPEFVMLDMYNAFMSAMKKHEDETGTSELKDTLRPCCAGITSEDSCGDVENGEKKYNVCIDPKMAFFWDSFHPTQAGWHAIYSVLKSSIANLFQTELWGSF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0835 347 PANTHER OSJNBB0059K02.9 PROTEIN 1 339 - -
Vvi13g0835 347 Pfam GDSL-like Lipase/Acylhydrolase 33 328 IPR001087 GO:0016788
Vvi13g0835 347 Gene3D SGNH hydrolase 19 337 IPR036514 -
Vvi13g0835 347 SUPERFAMILY SGNH hydrolase 32 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0835 Vvi-Chr13 9965376 9967390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0835 29 337 Pollen Coat Proteome AT1G75910 29.738 1.28e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0835 - - vvi:100260238 716.842