Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0829 ATGGACCACCAACCCCTCTTCATCTACCTTTTTCTCTTGCTTTCTGTTACAATATCTGCTGCAGGGGCTTATGTAGATCCTGATCGCTCCATCAAACTTTTTGTGTTTGGGGGCTCGTATGTTGATACCGGGAATAGGGATTCCACAGCTAGGTCATGGAAAGAACCGTATGGAATTACTGATCCTGGTAGACCTGCTGGTCACTTCTCTGACGGCCAAGTCTTCACTGAATACATAGCTTCACGGATGGGCATAAAGTCTCCTACACCATATAGATTTAGAAATCAAAGACCCATAAAACATGGAATGAATTTTGCTTATGGAGGGACAGGCGTCTTCGACACATGGGTTGCTGCACCAAACATGACAGAACAAATCTATTTGTTTGAACAACTCCTTCAAGAGAAAATCTATACCAGATATGACCTTAAGTTCTCCACTGCTCTGGTATCCGCTTCTGGCATGGATTATCGCATCTACCTTGCTAGACGTGGAAGTCTTCGGGGTTTTCCAGCCTTTATTATATCTGTTGTTAACCAGCTTGGCTTGGATCTACAACGTATTCATGATTTGGGAGTGCCGCAAGTAGCCGTTATGGGAATGCAGCCTCTTGGATGTTTGCCTGAATTTACAAGGGGATACTCATACGAGAAATGTAATTCAACAGGAAACTTCGCTGCACTGTATCACAACCTATTACTGGTAAAGAAGCTGAAGCCTGAATCTAAATTTGTGGTGCTTGATATGTACAATGCATTCATGTCTGCAATGAAGAAATTTGAAAACAAAACAGGTGATTTCCCCATATTTATGTGA 816 0.424 MDHQPLFIYLFLLLSVTISAAGAYVDPDRSIKLFVFGGSYVDTGNRDSTARSWKEPYGITDPGRPAGHFSDGQVFTEYIASRMGIKSPTPYRFRNQRPIKHGMNFAYGGTGVFDTWVAAPNMTEQIYLFEQLLQEKIYTRYDLKFSTALVSASGMDYRIYLARRGSLRGFPAFIISVVNQLGLDLQRIHDLGVPQVAVMGMQPLGCLPEFTRGYSYEKCNSTGNFAALYHNLLLVKKLKPESKFVVLDMYNAFMSAMKKFENKTGDFPIFM* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0829 271 PANTHER OSJNBB0059K02.9 PROTEIN 1 261 - -
Vvi13g0829 271 Pfam GDSL-like Lipase/Acylhydrolase 33 264 IPR001087 GO:0016788
Vvi13g0829 271 Gene3D SGNH hydrolase 28 265 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0829 Vvi-Chr13 9892584 9893933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0829 8 258 Pollen Coat Proteome AT1G75930 26.667 1.87e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0829 - - vri:117928386 446.432