Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0824 ATGGAGAAGGAAAGCCACTTCTTCATCGTCTGTTTTTGTCTCTTCATTTGCTTTAAAACTATTGCTACAGAAGCTCATGCTCATGGCTTCACCAAGCTTTTCGTGTTTGGAGACTCCTATGTTGATACTGGGAATAGGAATTTCAGTGCTAGGTCATGGAACCAACCATATGGAATCACTCTTCCTGGTAAACCGGCTGGCCACTACTCAAACGGTCGCGTCTTCAGTGACTACATAGCTTCATGGATGGGTATAAGGTCCCCTACACCATATAGATGGAGAAAAATGGAGAATACATCCCTGGAATATGGAATGAATTTTGCTTTCGGAGGGACCGGGGTCTTTGATACCCTGGTCAGTGCACCAAACATGACAATCCAAATCGATCTTTTTCAAAGACAACTCCAAAAGAAACTCTATACCAAGGTTGATCTTAACTCCTCCATTGCTCTGGTATCTCTGGCCGGCAATGACTATACTGCATACCTTGCCAGAAATGGCACTACTGAGGGTTTGTCAGCCTTCACTAAATCAATGATTAAGCAGCTTGGCTTGAACCTACAACGCATTCAAGGTTTAGGAGTGCGGAAAATAGCGGTTATGAATATACAGCCTCTTGGATGTTTGCCTTCAGAAACTATCTCAGATTTGTACAAGAATTGCAGCACATCGGGCAATTCAGTTGCCTTGTTTCACAACCAAGTATTGGAGAAAACCGTGGAAAAGCTGAACAACAAGAGCAAGGAATCTGTGTTTGTAATTCTCAACATGTACAAGGCATTTTTGTCTGCATTGAAGAAGCAAGCGAGCCAACCAGGAACTCTGAAGTTTAAGGATCCATTGAGGCCATGTTGCGAAGCAGTGAGTACTGGATATAAATGCGGGAACACAGAGCATGGAAAGAGGATGTACGTTGTATGCAACAACCCCAACTCAACATTCTTTTGGGATGATGTTCACCCTTCGCAGGCAGGCTGGCGTGCAGTTTACTTAGCATTAAAATCTTCCGCATACTCACTTGCTCTTATGTAG 1032 0.4351 MEKESHFFIVCFCLFICFKTIATEAHAHGFTKLFVFGDSYVDTGNRNFSARSWNQPYGITLPGKPAGHYSNGRVFSDYIASWMGIRSPTPYRWRKMENTSLEYGMNFAFGGTGVFDTLVSAPNMTIQIDLFQRQLQKKLYTKVDLNSSIALVSLAGNDYTAYLARNGTTEGLSAFTKSMIKQLGLNLQRIQGLGVRKIAVMNIQPLGCLPSETISDLYKNCSTSGNSVALFHNQVLEKTVEKLNNKSKESVFVILNMYKAFLSALKKQASQPGTLKFKDPLRPCCEAVSTGYKCGNTEHGKRMYVVCNNPNSTFFWDDVHPSQAGWRAVYLALKSSAYSLALM* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0824 343 Pfam GDSL-like Lipase/Acylhydrolase 33 329 IPR001087 GO:0016788
Vvi13g0824 343 Gene3D SGNH hydrolase 18 337 IPR036514 -
Vvi13g0824 343 PANTHER OSJNBB0059K02.9 PROTEIN 5 338 - -
Vvi13g0824 343 SUPERFAMILY SGNH hydrolase 32 330 - -
Vvi13g0824 343 CDD SGNH_plant_lipase_like 33 333 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0824 Vvi-Chr13 9743074 9745103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0824 21 329 Pollen Coat Proteome AT1G75910 28.955 5.58e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0824 - - vvi:100248183 671.003