Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0800 ATGAGGCAGAAAGTTTGGTGCAATTGTGATATTTGTTGTGGGTACCTCACATCTAGCTGGTTGATGGAGTTCGGCAATCTCTGTGACTGGTATACTCATCTTCTCCAAAAGTCCCCAACCCACACCATTCATATACATGTTCTTGGCAACACCATCACTGCAAATCCGGATAATGTTGAGTATATGCTCAAGACCCGATTCGATAATTATCCAAAAGGAAAACCATTCTCTACCATTCTTGGTGATCTCCTTGGTAAGGGTATCTTCAATGTGGACGGAGATTCATGGGTGTTTCAGAGGAAAATGGCTTCTCTAGAGCTTGGAAGTGTCTCTATACGATCATTTGCGTTTGAGGTTGTCATGGCCGAGATCAAACATCGGCTTCTACCCCTTTTATCATCATATGCTGAGAAAGATGGCAGCGTGTTGGATTTACAAGATGTTTTCCGAAGATTCACTTTTGATAATATTTGTAAATTTTCCTTCGGTTTGGACCCCGGTTGCCTCGAATTGGCCTTGCCCATCTCCCAATTCGCTGAATCCTTTGATCTTGCAACCAAGTTATCTGCAGAGAGAGCAATGGTAGCCTCACCATTGATCTGGAAGATCAAACGTTTGTTGAATTTAGGTTCAGAGAGAAGACTGAAGGAGGCCATCAAGAAGGTCAATGTCCTTGCCAAGGAGTTGATAATACAGAAGAGAAAACTAGGCTTTTCCACACACCAAGACCTTCTTTCAAGATTCATGGCTTGCATCAAGGACGATGACTACTTGAGAGACATTGTTATAAGCTTCATCCTCGCAGGCCGCGACACCATGGCTTCCGCACTGACAACATTCTTCTGGCTGGTGGCCACTCACCCAGAGGTTGAGTCCAAAATCAGAGACGAGGCAGACCGAATCATGCACCCAAATCAAGAGTTCCCTAGCTTTGAACTAATAAGGGAAATGCACTACCTCCATGCAGCTGTTCATGAGAGCCTAAGACTCTATCCACCAGTGCAATTCGATTCAAAGTTTGCCCGACAAGACGATGTTCTTCGAGACGGAACATTCGTGATGAAGGGCACTAGGGTTACCTACCATCCCTATGCAATGGGTCGAATTGAAGCAATTTGGGGTCCAGATTGCATGGAATTCAGGCCACAGAGGTGGCTAAATAATGGTACATTCTTTCCACAGAGCCCATTCAAGTTCCCAGTTTTTCAAGCTGGGATTAGGGTTTGCTTAGGGAAGGAAATGGCAGTGGTGGCGATGAAAAGCGTGGCGGCCGCGGTGCTCCGACCATTCAATATCCACGTTGTTCACGCCAACGTCGCACCCCGGTTCGATTCGGGGCTCACGGCCACCGTGAGAGGTGGCCTTCCTGTGGTGGTACGGGAGAGGAGGGCCACCGATCAGCATTGTTAA 1410 0.4681 MRQKVWCNCDICCGYLTSSWLMEFGNLCDWYTHLLQKSPTHTIHIHVLGNTITANPDNVEYMLKTRFDNYPKGKPFSTILGDLLGKGIFNVDGDSWVFQRKMASLELGSVSIRSFAFEVVMAEIKHRLLPLLSSYAEKDGSVLDLQDVFRRFTFDNICKFSFGLDPGCLELALPISQFAESFDLATKLSAERAMVASPLIWKIKRLLNLGSERRLKEAIKKVNVLAKELIIQKRKLGFSTHQDLLSRFMACIKDDDYLRDIVISFILAGRDTMASALTTFFWLVATHPEVESKIRDEADRIMHPNQEFPSFELIREMHYLHAAVHESLRLYPPVQFDSKFARQDDVLRDGTFVMKGTRVTYHPYAMGRIEAIWGPDCMEFRPQRWLNNGTFFPQSPFKFPVFQAGIRVCLGKEMAVVAMKSVAAAVLRPFNIHVVHANVAPRFDSGLTATVRGGLPVVVRERRATDQHC* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0800 469 PANTHER CYTOCHROME P450 15 456 - -
Vvi13g0800 469 SUPERFAMILY Cytochrome P450 21 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 Gene3D Cytochrome P450 16 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS E-class P450 group I signature 321 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 Pfam Cytochrome P450 42 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 CDD CYP86A 45 455 - -
Vvi13g0800 469 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS P450 superfamily signature 322 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0800 469 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0800 Vvi-Chr13 9237993 9239402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0800 6 462 Cytochrome P450 AT2G27690 62.017 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0800 K20624 - vvi:100248872 947.577