Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0786 ATGGCTGCAGCATTGGCTGGGGATGATCTAGCAAGGTCCATGAGCAGCAGGCGCAAAAGTTTAGCGTCTGGAAGTAGGCGAAGTTGGGCTTCTGCGAGTATTCTTGAGGTGTTGTCAGCACAAGGTGATGTTTTTCAGAGTAGGAGAGAGGATGATGAGGAAGAGTTGAAGTGGGCGGCCATTGAAAGGCTTCCAACCTTTGAGCGGTTGAGGAAGGGGATGCTTAAGCAAGTTTTGGATGATGGGAAGGTTGTCCATGAAGAAGTTGACTTCACCAATCTTGGTATGCAGGAGAGGAAGCATCTCATAGAGAGTATACTTAAGGTTGTTGAAGAAGATAATGAGAAGTTCCTTCTCAGGCTCAGGGAAAGGACTGATAGGGTTGGGGTTGAGATACCAAAAATCGAAGTCCGGTTTGAGCATTTATCAGTGGAAGGAGACGCATATGTTGGAACCAGAGCACTTCCTACTCTGCTCAATTCTACCATGAACTTCATAGAGGGAATACTTGGACTGATTAGGCTTTCCTCATCCAAGAAAAGGGTAGTCAAGATACTAAAAGATGTGAGTGGGATCGTGAAACCATCAAGAATGACCCTGCTTCTGGGACCTCCAGCCTCAGGGAAAACTACCCTGCTGCAGGCGCTTGCTGGGAAGATGGACAAAGATCTAAGGATGGAAGGAAAAATCACATACTGTGGTCATGAATTATCAGAGTTTGTTCCTCAGAGAACATGTGCTTACATTAGCCAGCATGATCTGCACCATGGTGAGATGACAGTTAGGGAAACGTTGGACTTCTCAGGACGATGTTTGGGAGTTGGAACCAGATATGAACTACTAGCAGAATTGTCAAGACGAGAAAAAGAATCTGCAATTAAGCCAGATCCTGAGATAGATGCATTCATGAAAGCAACAGCAATGGCAGGCCAAGAAACTAGTTTGGTTACAGATTATGTGCTCAAGATGCTGGGATTAGACATCTGCGCTGACATTGTGTTGGGAGATGATATGAGAAGGGGCATTTCTGGTGGAGAAAAGAAGCGTGTTACTACCGGAGAAATGTTGGTTGGACCAGCAAAGGCTCTTTTCATGGATGAAATATCAACTGGTCTGGACAGTTCCACCACTTTTCAGATTGTCAAGTTTATGAGGCAGATGGTTCATATCATGGAAGTAACCATGATAATCTCTCTTCTCCAACCTGCACCTGAAACTTATGATCTTTTTGATGCCATTATCTTACTATGTGAGGGTCAGATTGTGTACCAAGGTCCCCGTGAAAACATCCTTGAGTTCTTTGAAAGCGTGGGCTTCAAATGCCCAAAAAGAAAAGGAGTTGCAGACTTCTTGCAAGAGGTGACTTCCAGAAAGGAACAAGAACAATACTGGTTCAGACACAATGAACCTTACAAATATATCTCAGTGCCCGAGTTTGCACAACATTTCAACTCTTTCCACATTGGCCAGAAGCTTTCAGACGACCTTGGAATCCCTTACAATAAGAGCAGAACCCATCCTGCAGCATTGGTGACAGAAAAGTATGGAATCTCCAACTGGGAACTCTTCAAGGCATGCTTTGCCAGGGAGTGGCTATTGATGAAGCGCAACTCTTTTATATACATATTCAAGACAACCCAGATTACAATCATGTCAGTAATTGCCATGACAGTGTTCTTCAGAACAGAAATGAAGCATGGCCAACTGCAAGATGGAGTAAAATTCTATGGGGCTCTGTTTTATAGTCTCATAAATGTAATGTTTAACGGAATGGCAGAGCTTGCATTGACTCTTTTCAGGCTCCCAGTGTTTTTTAAGCAGAGGGATTTCTTGTTTTACCCGGCATGGGCTTTTGCATTACCAATTTGGGTCCTTAGGATCCCCTTGTCACTCATGGAGTCAGGGATATGGATCATTCTCACGTATTACACTATTGGGTTTGCCCCTTCTGCTAGTAGGTTTTTCCGTCAATTACTGGCATTCTTTGGCGTGCATCAGATGGCTCTATCTCTCTTCCGCTTCATTGCAGCACTTGGAAGAACACAGATTGTGGCCAACACTCTTGGTACCTTTACATTGCTACTGGTTTTTGTTCTGGGTGGTTTCATTGTAGCCAAAGATGATATTGAACCATGGATGATATGGGGATATTATGCTTCTCCAATGACGTATGGACAAAATGCGCTTGTCATCAATGAATTTCTTGATGACAGATGGAGTGCGCCCAACATCGATCAAAGAATTCCAGAACCCACAGTTGGAAAAGCTCTTCTCAAGGCAAGAGGCATGTTTGTGGATGGCTATTGGTATTGGATTTGTGTTGGTGCACTCATGGGGTTTTCTCTGCTCTTCAATATCTGTTTCATTGTAGCTCTGACATATTTGGACCCTCTGGGAGACTCAAAATCTGTCATTATTGATGAGGAAAATGAAGAAAAGAGTGAGAAGCAGTTTTTCTCTAACAAACAGCATGATCTGACCACCCCAGAAAGAAATTCAGCTACTGCCCCAATGTCTGAAGGTATTGATATGGAAGTAAGGAAAACTAGAGAAAGCACCAAATCAGTTGTCAAAGATGCAAATCATACACCTACTAAAAGGGGAATGGTGTTGCCCTTCCAGCCCTTATCACTTGCATTTGAGCATGTGAATTACTATGTTGATATGCCTGCTGGAATGAAGAGCCAAGGAATTGAAGCGGATCGTCTCCAACTGCTGCGGGATGCTAGTGGTGCTTTCAGGCCAGGTATTCAAATAGCATTAGTTGGTGTTAGTGGTGCTGGAAAGACCACTTTGATGGATGTGTTAGCAGGAAGGAAAACTGGTGGATACATTGAAGGAAGTATCAGTATTTCTGGTTACCCCAAAAACCAAGCAACTTTCGCTCGTATTAGTGGATACTGTGAGCAGAATGATATACATTCTCCAAATGTAACTGTTTATGAATCTCTTGTTTACTCTGCCTGGCTGCGCCTTGCTCCAGATGTCAAGAAGGAAACAAGGCAGGTGTTTGTTGAGGAAGTAATGGAATTGGTTGAGCTTCACCCCCTGAGGGATGCTTTGGTTGGCCTTCCCGGAATACATGGGCTTTCAACAGAACAGAGGAAGAGGCTGACAGTAGCTGTAGAATTGGTTGCTAACCCCTCCATCCTCTTCATGGATGAGCCAACGACAGGCCTTGATGCTAGAGCAGCCGCAGTTGTTATGCGTACTGTTAGAAACACAGTGGATACAGGGCGGACTGTTGTCTGCACCATTCACCAGCCAAGCATAGACATCTTTGAAGCTTTCGATGAGCTACTGCTGATGAAGAGAGGAGGACAAATCATTTATGCTGGAGCTCTTGGTCGCAATTCTCACAAGCTTGTAGAGTACTTTGAAGCTGTCCCGGGGGTTCCTAAAGTCAGAGATGGTCAAAATCCTGCTACATGGATGCTGGAGATCAGCTCTGCTGCAGTTGAGGCTCAACTTGGTGTGGATTTTGCAGAAATTTATGCTAAATCTGAACTCTATCAGAGGAATCAGGAACTCATCAAAGAGCTGAGCACACCATCACCAGGATCCAAAGACCTTTATTTCCCCACCAAATACTCTCAAAGCTTTATTAGTCAATGCAAGGCTTGCTTCTGGAAACAGCACTGGTCTTATTGGAGGAATCCTCCCTATAATGCTATCCGGTTCTTCTTGACCATAATTATTGGTGTTCTATTTGGAGTAATTTTCTGGAACAAAGGAGAGAAGACAGACAAGGAACAAGATCTAATAAATCTGCTGGGAGCTATGTTTTCAGCTGTCTTCTTCCTTGGAGCCACCAACACTTCCTCAGTGCAGCCTGTTGTGGCAATTGAGAGAACAGTCTTCTACCGTGAAAGGGCAGCTGGGATGTATTCAGCATTGCCTTACGCATTTGCCCAGGTGGCCATAGAGGCAATTTACGTTGCAATCCAAACTTTGGTTTACAGTCTTCTCCTCTACTCTATGATGGGATTCTACTGGCGAGTGGACAAGTTCTTATGGTTCTACTACTACCTACTCATGTGCTTTATTTACTTCACATTGTATGGAATGATGATCGTGGCACTCACTCCCAACCATCAAATTGCTGCCATTGTTATGTCGTTTTTCCTAAGCTTTTGGAATCTCTTCGCTGGTTTTCTCATCCCTAGGATGCAAATACCAATATGGTGGAGGTGGTACTACTGGGCTTCCCCTGTTTCTTGGACCATCTACGGACTAGTGACATCTCAGGTGGGCGACAAGGAGGATCCGGTTCAGGTACCTGGAGCAGGTGTCAAGTCAGTGAAGCTGTATCTTAAGGAGGCTTTAGGCTTTGAATATGATTTCCTGGGAGCGGTTGCGTTGGCTCATATTGGTTGGGTCCTCCTCTTCTTGTTCGTCTTTGCCTATGGCATTAAGTTCCTTAACTTCCAAAGGAGGTAA 4440 0.443 MAAALAGDDLARSMSSRRKSLASGSRRSWASASILEVLSAQGDVFQSRREDDEEELKWAAIERLPTFERLRKGMLKQVLDDGKVVHEEVDFTNLGMQERKHLIESILKVVEEDNEKFLLRLRERTDRVGVEIPKIEVRFEHLSVEGDAYVGTRALPTLLNSTMNFIEGILGLIRLSSSKKRVVKILKDVSGIVKPSRMTLLLGPPASGKTTLLQALAGKMDKDLRMEGKITYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKESAIKPDPEIDAFMKATAMAGQETSLVTDYVLKMLGLDICADIVLGDDMRRGISGGEKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMEVTMIISLLQPAPETYDLFDAIILLCEGQIVYQGPRENILEFFESVGFKCPKRKGVADFLQEVTSRKEQEQYWFRHNEPYKYISVPEFAQHFNSFHIGQKLSDDLGIPYNKSRTHPAALVTEKYGISNWELFKACFAREWLLMKRNSFIYIFKTTQITIMSVIAMTVFFRTEMKHGQLQDGVKFYGALFYSLINVMFNGMAELALTLFRLPVFFKQRDFLFYPAWAFALPIWVLRIPLSLMESGIWIILTYYTIGFAPSASRFFRQLLAFFGVHQMALSLFRFIAALGRTQIVANTLGTFTLLLVFVLGGFIVAKDDIEPWMIWGYYASPMTYGQNALVINEFLDDRWSAPNIDQRIPEPTVGKALLKARGMFVDGYWYWICVGALMGFSLLFNICFIVALTYLDPLGDSKSVIIDEENEEKSEKQFFSNKQHDLTTPERNSATAPMSEGIDMEVRKTRESTKSVVKDANHTPTKRGMVLPFQPLSLAFEHVNYYVDMPAGMKSQGIEADRLQLLRDASGAFRPGIQIALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPNVTVYESLVYSAWLRLAPDVKKETRQVFVEEVMELVELHPLRDALVGLPGIHGLSTEQRKRLTVAVELVANPSILFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYAGALGRNSHKLVEYFEAVPGVPKVRDGQNPATWMLEISSAAVEAQLGVDFAEIYAKSELYQRNQELIKELSTPSPGSKDLYFPTKYSQSFISQCKACFWKQHWSYWRNPPYNAIRFFLTIIIGVLFGVIFWNKGEKTDKEQDLINLLGAMFSAVFFLGATNTSSVQPVVAIERTVFYRERAAGMYSALPYAFAQVAIEAIYVAIQTLVYSLLLYSMMGFYWRVDKFLWFYYYLLMCFIYFTLYGMMIVALTPNHQIAAIVMSFFLSFWNLFAGFLIPRMQIPIWWRWYYWASPVSWTIYGLVTSQVGDKEDPVQVPGAGVKSVKLYLKEALGFEYDFLGAVALAHIGWVLLFLFVFAYGIKFLNFQRR* 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0786 1479 Pfam ABC transporter 907 1057 IPR003439 GO:0005524
Vvi13g0786 1479 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 35 1479 - -
Vvi13g0786 1479 MobiDBLite consensus disorder prediction 821 835 - -
Vvi13g0786 1479 Pfam Plant PDR ABC transporter associated 747 805 IPR013581 -
Vvi13g0786 1479 MobiDBLite consensus disorder prediction 1 29 - -
Vvi13g0786 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
Vvi13g0786 1479 Pfam ABC-2 type transporter 401 453 IPR043926 GO:0140359
Vvi13g0786 1479 Pfam ABC-2 type transporter 1087 1156 IPR043926 GO:0140359
Vvi13g0786 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 878 1131 IPR003439 GO:0005524
Vvi13g0786 1479 Pfam ABC-transporter N-terminal 93 160 IPR029481 -
Vvi13g0786 1479 MobiDBLite consensus disorder prediction 816 836 - -
Vvi13g0786 1479 Gene3D - 173 475 IPR027417 -
Vvi13g0786 1479 FunFam ABC transporter G family member 40 892 1122 - -
Vvi13g0786 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 1113 IPR027417 -
Vvi13g0786 1479 Gene3D - 893 1125 IPR027417 -
Vvi13g0786 1479 SMART AAA_5 915 1107 IPR003593 GO:0016887
Vvi13g0786 1479 SMART AAA_5 195 428 IPR003593 GO:0016887
Vvi13g0786 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 170 443 IPR003439 GO:0005524
Vvi13g0786 1479 FunFam ABC transporter G family member 34 173 477 - -
Vvi13g0786 1479 Pfam ABC transporter 186 368 IPR003439 GO:0005524
Vvi13g0786 1479 CDD ABCG_PDR_domain1 172 425 IPR034001 -
Vvi13g0786 1479 CDD ABCG_PDR_domain2 875 1113 IPR034003 -
Vvi13g0786 1479 Pfam ABC-2 type transporter 1204 1415 IPR013525 GO:0016020|GO:0140359
Vvi13g0786 1479 Pfam ABC-2 type transporter 522 734 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0786 Vvi-Chr13 8818196 8827874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0786 903 1090 Calmodulin-binding Proteins AT2G36910 25.500 3.91e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0786 K08711 - vvi:100253970 2912.48