Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0772 ATGCCAACGAGAACAAGTAACTTTTTCAAATCGAAAGACTTCTCTCTGGGTCATCGTCTTGCCATCCCAAGAAGACCAAGAAACCACCGAAGCTATATAGTTTGCGCATTCTGTGATCGAAGAGCTACAATGGATTCTGTTGTAGAAGATGAGAAGAAGCACGATCAGGTTCTCGAAGAAACGACCAACAAATTTGAAGATGAAGGTGATCAGGCTCTTCAAGAAACGATCGACAAATTTGAAGATGACGGTGATCAGTATCCTCAAGAATCGATCAGGATCAAGAAGCGACCACCACGGTGCCATGATGATGATGAGGGCGGGTGTGTTCAGGAGAAAAAGAAGCGAATGATGAAGAAGATGATGGAGAAGGCAAGGTGCCCATCTCCCCATGCAACGCCAGAGCTCCCTGTCATCCTCAGGAATCGGATCAGGGCTCTGGGGGGTTCTGATGTCACTTTTGTAATCCAGAAGCCTCTCTTCAAGACTGATGTGAGTTCCGGTCACAACCGTCTGTCCATACCGTTGAACCAGGTACAACAAAGTTTCCTCACAACTGAAGAGAGCGAGAGGTTGAACTCGGGAGGAAACGGAAAAAAATGTTCAGATATGGAAGTGATGTTGATTGAGCCCTCCCTTCATCGGGAAACCATCAGTCTGAGGAAGTGGAACATGAAGAAAGCTTCCGGAAATTCTACCTCAATGTATGTGTTGGTGACTAATTGGAAATCGGTTACGGAAAGGAATAGCATGAAGGAAGATGAAACGGTGCAGCTCTGGTCTTTTCGAATCAAGTCCAAGTTGGGTTTCGCTCTTGTAAAGAGAAGACTACAAGATGATCCTAGGAATCGTTCATTAAGGGGCATCCTGGATAGCTGA 879 0.4573 MPTRTSNFFKSKDFSLGHRLAIPRRPRNHRSYIVCAFCDRRATMDSVVEDEKKHDQVLEETTNKFEDEGDQALQETIDKFEDDGDQYPQESIRIKKRPPRCHDDDEGGCVQEKKKRMMKKMMEKARCPSPHATPELPVILRNRIRALGGSDVTFVIQKPLFKTDVSSGHNRLSIPLNQVQQSFLTTEESERLNSGGNGKKCSDMEVMLIEPSLHRETISLRKWNMKKASGNSTSMYVLVTNWKSVTERNSMKEDETVQLWSFRIKSKLGFALVKRRLQDDPRNRSLRGILDS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0772 292 Gene3D - 148 284 IPR015300 -
Vvi13g0772 292 Pfam B3 domain-containing protein At2g31720-like 139 247 IPR005508 GO:0003677
Vvi13g0772 292 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 55 280 IPR005508 GO:0003677
Vvi13g0772 292 SUPERFAMILY DNA-binding pseudobarrel domain 154 280 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0772 Vvi-Chr13 8474556 8475434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0772 135 290 B3 DNA Binding Superfamily AT1G05930 25.316 5.58e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0772 - - vvi:104881176 484.952