Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0771 ATGATGAAGAAGATGATGGATAAGGCAAGGTGTCCGTCTCCCCATGCAACGCCGGAGCTCCCTGTCATCCTCAGGAATCGGATCAGGGCTTTGGGGGGTTCTGATGTCACTTTTGTAATCCAGAAGCCTCTCTTCAAGACTGATGTGAGTTCCGGTCACAACCGTCTGTCCATATCGTTGAACCAGGTACAACAAAGTTTCCTCACACCTGAAAAGAGCGAGAGGTTGAACTCGGGGGGAAACGGAAAAAAATGTGCAGCTATGGAAGTGATGTTGATTGAGCCCTCCCTTCATCGGGAAACCATCAGTCTGAGGAAGTGGAACATGAAGAAAGCTTCCGGAAATTCTACCTCAATGTATGTGTTGGTGACTAATTGGAAATCGGTTACGGAAAGGAATAGCATGAAGGAAGATGAAACGGTGCAGGTCTGGTCTTTTCGAATCAAGTCCAAGTTGGGTTTCGCTCTTGTAAAGAGAAGACTACAAGATGATCCTAGGAATCGTTCATTAAGGGGCATCCTGGATAGCTGA 531 0.4689 MMKKMMDKARCPSPHATPELPVILRNRIRALGGSDVTFVIQKPLFKTDVSSGHNRLSISLNQVQQSFLTPEKSERLNSGGNGKKCAAMEVMLIEPSLHRETISLRKWNMKKASGNSTSMYVLVTNWKSVTERNSMKEDETVQVWSFRIKSKLGFALVKRRLQDDPRNRSLRGILDS* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0771 176 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 8 164 IPR005508 GO:0003677
Vvi13g0771 176 Pfam B3 domain-containing protein At2g31720-like 23 131 IPR005508 GO:0003677
Vvi13g0771 176 SUPERFAMILY DNA-binding pseudobarrel domain 38 164 IPR015300 -
Vvi13g0771 176 Gene3D - 32 168 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0771 Vvi-Chr13 8470709 8471239 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0771 19 174 B3 DNA Binding Superfamily AT1G05930 24.684 1.38e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0771 - - vvi:104881185 351.288