Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0765 ATGGATTATGTGGTAGAAGATGAGAAGAAACACGATCAACGTCTTGAAGAAACGATGAAGATATTTGAATATGGAGGTGATCGGTGTCTTCAAAAAACGATCAAGATCAAGAAGCGGCCACCACGGTGCCATGATGATGAGAAGAAACACGATCAGCGTCTTGAAGAAACGATGAAGATATTCGAAGATGGAGGTGATCGGTGTCTTCAAAAAACGATCAAGATTAAAAAACGGCCACCACGGTGCCATGATGATGACGACAATGAAGATGGTGATGGGGGGTGTGTTCAGGAGAAAAAGAAGCTGAGGATGAAGAAGATGATGGATAGGGCAAGGTGTCCGTCTCTCCATGCAACACCAGAGCTCCCTAAGCCTCTCTTCAAGACTGATGTGAGTCCCGGTCACAATCGACTATCCATACCCTTGAACCAGATACGACAAAGTTTCCTCACACCTGAAGAGAACGAGAGGTTGAACTCAGGAGGAAACGGAAAAAAATGTGTAGATATGGAAGTGATGTTGATTAAGCCCTCCCTTCATCGGGAAACCATCAGTCTGAGGAAGTGGAACATGAAGAAAGCTTCCGGAAATTCTACCTCAATGTATGTGTTGGTGACTAATTGGAAATCGGTTACGGAAAGGAATAACATGAAGGAAGATGAAACGGTGCAGCTCTGGTCTTTTCGAATCAAGTCCAAGTTGGGTTTCGCTCTTGTAAAGAGAAGACTACAAGATGATCCTAGGAATTGTTCATTAAGGGGTACCCTGGATAGCTGA 777 0.4414 MDYVVEDEKKHDQRLEETMKIFEYGGDRCLQKTIKIKKRPPRCHDDEKKHDQRLEETMKIFEDGGDRCLQKTIKIKKRPPRCHDDDDNEDGDGGCVQEKKKLRMKKMMDRARCPSLHATPELPKPLFKTDVSPGHNRLSIPLNQIRQSFLTPEENERLNSGGNGKKCVDMEVMLIKPSLHRETISLRKWNMKKASGNSTSMYVLVTNWKSVTERNNMKEDETVQLWSFRIKSKLGFALVKRRLQDDPRNCSLRGTLDS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0765 258 Pfam B3 domain-containing protein At2g31720-like 104 213 IPR005508 GO:0003677
Vvi13g0765 258 Gene3D - 117 250 IPR015300 -
Vvi13g0765 258 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 9 246 IPR005508 GO:0003677
Vvi13g0765 258 SUPERFAMILY DNA-binding pseudobarrel domain 119 246 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0765 Vvi-Chr13 8424236 8425089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0765 122 242 B3 DNA Binding Superfamily AT1G05930 27.642 2.63e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0765 - - vvi:109123654 473.781