Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0764 ATGGATTTTGTTGTAAAAGATGAGAAGAAACACGACCAGGTTCTCGAAGAAACGACCAACAAATTTGAAGATGAAGGCGATCAGGCTCTTCAAGAAACGATCGACAAATTTGAAGATGACGGTGATCAGTGTCCGCAAGAATCGATCAGGATCAAGAAGCGAGCCCCATGGTGCCATGATGATGATGAGGGCGGGTGTGTTCAGGAGAAAAAGAAGCGAAGGATGAAGAAGATAATGGATAAGGCAAGGTTTCCGTCTCCCCATGCAACACCAGAGCTCCCTGTCATTCTCAGGAATCAGATCAAGGCTTTGGGGGGTTCTGATGTCATGTTTGTAATCGAGAAACCTCTTTTCAAGATTGATGTGAGTACCGGTCACAACCGTCTGTCCATACCCGTAAACCAGATCCAAAAAAGTTTCCTCACACCTGAAGAGAGTGAGAGGTTGAACTCAGGAAGAAACGGAAAAAAATGTGCAGATATGGAAGTGATGTTGATTGAGCCCTCCCTTCATCGGGAAACCATCAGCTTGAGGAAGTGGGACATGAAGAAAGCTTCCGAAAATTCTAGCTCAATGTATGTGTTGGTGACTAATTGGAATTCGGTTGTATGGAGGAATAGCATGAGTGAAGATGAAACGGTGCAGCTCTGGTATTTTCGAATCAAGTCCAAGTTGGGTTTCACTCTTGTAAAGAGAAGACTACAAGATGATCCTAGGAATCGTTCATTAAGGGGCATCCTGGATAGTTGA 750 0.4427 MDFVVKDEKKHDQVLEETTNKFEDEGDQALQETIDKFEDDGDQCPQESIRIKKRAPWCHDDDEGGCVQEKKKRRMKKIMDKARFPSPHATPELPVILRNQIKALGGSDVMFVIEKPLFKIDVSTGHNRLSIPVNQIQKSFLTPEESERLNSGRNGKKCADMEVMLIEPSLHRETISLRKWDMKKASENSSSMYVLVTNWNSVVWRNSMSEDETVQLWYFRIKSKLGFTLVKRRLQDDPRNRSLRGILDS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0764 249 SUPERFAMILY DNA-binding pseudobarrel domain 111 237 IPR015300 -
Vvi13g0764 249 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 38 237 IPR005508 GO:0003677
Vvi13g0764 249 Pfam B3 domain-containing protein At2g31720-like 98 203 IPR005508 GO:0003677
Vvi13g0764 249 Gene3D - 106 241 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0764 Vvi-Chr13 8418509 8419258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0764 59 247 B3 DNA Binding Superfamily AT1G05930 25.381 1.25e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0764 - - vvi:104881184 501.516