Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0736 ATGAATTCACTGTATGGTTGTATTTATACCTTGATCAATTGGGTTGTTCTAAGGTACCACTTGAATGATGCTATACTGGAAGAAGGAATTACCTTCAATCGGGCATACGGAATGACATCATTTGAATACCTAAGAACAAATCAAAGATTCAAGAGGGTGTTCAATGAAGCAATGTCAAATCATACTACGTTGATAATGAAAAGGATACTCCAGATTTACAAAGGGTTTGAAGGCCTTAAAGTGTTGGTTGATGTGGGAGGTGGTATTGGGGTCACTGTTAGAATCATCACTTCTAAGTTTCCTCATATTAAGGGCATCAATTATGATATGTCTCATGTTTTAATGGACGTCTCTCTTATCCTATTATTGAATGTTAGGTGCCTTACTCGGGCGACATAG 399 0.3734 MNSLYGCIYTLINWVVLRYHLNDAILEEGITFNRAYGMTSFEYLRTNQRFKRVFNEAMSNHTTLIMKRILQIYKGFEGLKVLVDVGGGIGVTVRIITSKFPHIKGINYDMSHVLMDVSLILLLNVRCLTRAT* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0736 132 PANTHER O-METHYLTRANSFERASE 21 114 IPR016461 GO:0008168
Vvi13g0736 132 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 114 IPR029063 -
Vvi13g0736 132 Pfam O-methyltransferase domain 19 116 IPR001077 GO:0008171
Vvi13g0736 132 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 132 IPR016461 GO:0008168
Vvi13g0736 132 Gene3D Vaccinia Virus protein VP39 7 124 IPR029063 -
Vvi13g0736 132 FunFam Os12g0199500 protein 2 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0736 Vvi-Chr13 7658584 7658982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0736 19 118 Monolignol Biosynthesis Gene Families AT5G54160 62.000 5.17e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0736 K13066 - vvi:100265976 152.14