Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0722 ATGGATTCTGTGGTAGAAGATGAGAAGAAACATGATCAACATCTTGAAGAAACGATGAAGATATTGGAAGATGGAGATGATCAGTGTCTTCAAAAAAAGATCAAGATCAAGAAGCGGCCACCACGGTGCCATGATGATGACGACAACGATGATGATGAGGGGGTGTGTGTTCAGGAGAAAAAGAAGTTGATGAAGAAGAAGATGATGGATAAGGCAATTTGTTCATCTCCCCATGCAACGCCAAAGCTCCCTGTCATCCTCAGGAATCGGATTAAGGCTCTAGGGGGTTCTGATGTCACTTTTGTAATCCAGAAGCCTCTCTTCAAGAGTGATGTGAGACTCAGTCAGAACCGTCTATCCATACCCTTGAATCAGATACAACAAAGTTTCCTCACACCTGAAGAGAGTGAGAGGTTGAACTCAGGAGGAAACGGAAAAAAATGTGTAGATATGGAAGTGATGTTGATTGAGCCATCCCTTCATCGAGAAACCATCAGTCTGAGGAAGTGGGACATGAAGAAAGCTTCCGGAAATTCTACCTCAATGTATGTGTTGGTGACTAATTGGAATTCGGTTGTACGGAGGAATAGTATGAGTAAAGATGAAACGGTGCAGCTCTGGTCTTTTCGAATCAAGTCCAAGTTGGGTTTCGCTCTTGTAAAGAGAAGACTACAAGATGATCCTAGGAATAGTTCATTAAGGGGCATCCTGGATAGTTGA 720 0.4292 MDSVVEDEKKHDQHLEETMKILEDGDDQCLQKKIKIKKRPPRCHDDDDNDDDEGVCVQEKKKLMKKKMMDKAICSSPHATPKLPVILRNRIKALGGSDVTFVIQKPLFKSDVRLSQNRLSIPLNQIQQSFLTPEESERLNSGGNGKKCVDMEVMLIEPSLHRETISLRKWDMKKASGNSTSMYVLVTNWNSVVRRNSMSKDETVQLWSFRIKSKLGFALVKRRLQDDPRNSSLRGILDS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0722 239 Gene3D - 95 232 IPR015300 -
Vvi13g0722 239 Pfam B3 domain-containing protein At2g31720-like 87 194 IPR005508 GO:0003677
Vvi13g0722 239 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 18 227 IPR005508 GO:0003677
Vvi13g0722 239 SUPERFAMILY DNA-binding pseudobarrel domain 101 227 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0722 Vvi-Chr13 7440915 7441634 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0722 87 223 B3 DNA Binding Superfamily AT1G05930 26.619 2.42e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0722 - - vvi:104881181 445.662