Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0719 ATGGATTCTGTGGTAGAAGATGAGAAGAAACACGATCAACGTCTTGAAGAAACGATGAAGATATTGGAAGATGGAGATGATCAGTGTCTTCAAAAAAAGATCAAGATCAAGAAGCGGCCACCACGGTGCCATGATGATGATGACGACGACGATGATGATGAGGGGGTGTGTGTTCAGGAGAAAAAGAAGCTGATGATGAAGAAGATGATGGATAAGGCAATTTGTTCGTCTCCCCATGCAACGCCAGAGCTCCCTGTCATCCTCAGGAATCGGATTAAGGCTCTAGGGGGTTCTGATGTCACTTTTGTAATCCAGAAGCCTCTCTTCAAGAGTGATGTGAGACTCAGTCAGAACCGTCTATCCATACCCTTGAATCAGATACAACAAAGTTTCCTCACACCTGAAGAGAGCGAGAGGTTGAACTCAGGAGGAAACGGAAAAAAATGTGCAGATATGGAAGTGATGTTGATTGAGCCCTCCCTTCATCGAGAAACCATCAGTCTGAGGAAGTGGGACATGAAGAAAGCTTCCGGAAATTCTACCTCAATGTATGTGTTGGTGACTAATTGGAATTCGGTTGTACGGAGGAATAGTATGAGTAAAGATGAAACGGTGCAGCTCTGGTCTTTTCGAATCAAGTCCAAGTTGGGTTTCGCTCTTGTAAAGAGAAGACTACAAGATGATCCTAGGAATAGTTCATTAAGGGGCATCCTGGATAACTGA 723 0.4412 MDSVVEDEKKHDQRLEETMKILEDGDDQCLQKKIKIKKRPPRCHDDDDDDDDDEGVCVQEKKKLMMKKMMDKAICSSPHATPELPVILRNRIKALGGSDVTFVIQKPLFKSDVRLSQNRLSIPLNQIQQSFLTPEESERLNSGGNGKKCADMEVMLIEPSLHRETISLRKWDMKKASGNSTSMYVLVTNWNSVVRRNSMSKDETVQLWSFRIKSKLGFALVKRRLQDDPRNSSLRGILDN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0719 240 SUPERFAMILY DNA-binding pseudobarrel domain 102 228 IPR015300 -
Vvi13g0719 240 Gene3D - 96 233 IPR015300 -
Vvi13g0719 240 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 18 228 IPR005508 GO:0003677
Vvi13g0719 240 Pfam B3 domain-containing protein At2g31720-like 88 195 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0719 Vvi-Chr13 7413997 7414719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0719 83 224 B3 DNA Binding Superfamily AT1G05930 26.389 4.62e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0719 - - vvi:104881180 442.195