Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0681 ATGGTGGTTGCCGGAATTGCTGCCGGAGGGGGTGGTTGGGCTGACATGAAGAGCCTATCAGTCCAAGTCATCACCGGTCGGTGGTTCGTGGTGTTTGCATCATTTCTGATCATGTCGGCCGCCGGTGCAACCTACATGTTCGGTCTCTACTCAGGCACAATCAAATCCGCTCTGGGATATGATCAAACCACCCTGAATTTGCTCAGCTTTTTCAAGGACTTGGGAGCAAACGTTGGGGTCCTTTCAGGCCTCATCAACGAGGTCACGCCCCCATGGGTTGTGCTATCAATGGGAGCAGCCCTGAATTTTTTTGGCTACTTCATGATATGGCTTGCCGTCTCTCAGAAAATAGCCAAGCCCCAGGTGTGGCACATGTGTCTCTACATATGCATCGGTGCAAATTCCCAGGCTTTCGCTAACACCGGATCTCTGGTGACCTGCGTTAAGAACTTCCCGGAGAGCCGAGGCGTGGTGTTGGGGATACTGAAGGGGTATGTTGGGCTGAGTGGTGCAATCATCACACAGCTCTACCATGCCTTCTATGGCAATGACACCAAGGCTCTTATTTTGCTCATAGCTTGGCTGCCTGCTGCTATATCTTTTGCATTTCTTCGGACCATTCGAATCATGAAGGTGATTCGACAGGAGAACGAGCTCAAAGTTTTCTACAATTTTCTTTACATCTCTCTTGGCCTCGCTGGGTTTCTCATGATTATAATTATAGTAGAGAAAGAGCTGACTTTTTCTCAGAGTGAGTACGGGGGGAGCGCCGCTCTAGTTCTTCTCTTGCTCTTTCTCCCGCTCGCTGTTGTTATACAAGAGGAATTCAAGCTGTGGAAGATCAAGCAAGAGGCCCTGCGTGAGCCTCCACAGTTGAAAATCATCGCCGAGAATTTGAACACTGAGACTTCTTCATCTTCACTACCGCTTGAATCAACAGCTGCAACAAGTTCTCTCCCCGAACAACTAAGCTCACAGAAGGAAGTTTCTTGCTTCTCCAACGTGTTCAGGCCACCGGACAGAGGAGAGGACTACACCATACTTCAAGCCCTTTTCAGCATAGACATGCTTATTCTATTCTTCACTACAATTTGTGGTGTTGGAGGGACTTTAACAGCCATAGACAACTTGGGACAGATTGGGAGTTCACTGGGGTACCCCCAGAAAAGCCTGAGCACTTTCATATCGCTGGTTAGCATATGGAACTATCTTGGAAGAGTAACTGCAGGCTTTGGATCGGAGATCGTCTTAGACAAGTACAAATTCCCCCGCCCTTTGATGCTCACACTCATCCTCCTCCTCTCATGTGTTGGCCATCTCCTCATCGCCTTCAACATCAAGAATGGTCTCTACTTTGCATCAATAATTATCGGGTTTTGCTTCGGTGCTCAATGGCCATTACTTTTCGCAGTCATATCTGAAATTTTTGGCCTCAAATACTACTCCACGTTGTACAATTTTGGCTCAGTGGCTAGCCCAATCGGTTCCTATTTACTCAATGTGAGGGTGGCCGGATATCTCTATGATAAAGAGGGAAAAAGACAAATGGCAGCCCTGGGAAAAAAAAGGAAGCGTGGTGAGGACTTGGACTGCACAGGAGTAGAGTGCTTCAAATTGTCTTTCATTATAATCACAGCGGCCACACTTTTCGGTTCACTTGTATCGCTCATACTAGTGCTTCGGACCAGAAAGTTCTACAAGGGTGACATTTACAAGAAGTTCCGGGAACAAGCCAAAGCAGCCGAGACTGAGATGGCCCAGGCCGGGAATGGGGCAGCCCCATCGCTGGCAAAAGGTTAG 1800 0.4822 MVVAGIAAGGGGWADMKSLSVQVITGRWFVVFASFLIMSAAGATYMFGLYSGTIKSALGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSMGAALNFFGYFMIWLAVSQKIAKPQVWHMCLYICIGANSQAFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYHAFYGNDTKALILLIAWLPAAISFAFLRTIRIMKVIRQENELKVFYNFLYISLGLAGFLMIIIIVEKELTFSQSEYGGSAALVLLLLFLPLAVVIQEEFKLWKIKQEALREPPQLKIIAENLNTETSSSSLPLESTAATSSLPEQLSSQKEVSCFSNVFRPPDRGEDYTILQALFSIDMLILFFTTICGVGGTLTAIDNLGQIGSSLGYPQKSLSTFISLVSIWNYLGRVTAGFGSEIVLDKYKFPRPLMLTLILLLSCVGHLLIAFNIKNGLYFASIIIGFCFGAQWPLLFAVISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVAGYLYDKEGKRQMAALGKKRKRGEDLDCTGVECFKLSFIIITAATLFGSLVSLILVLRTRKFYKGDIYKKFREQAKAAETEMAQAGNGAAPSLAKG* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0681 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 569 - -
Vvi13g0681 599 Gene3D MFS general substrate transporter like domains 341 566 IPR036259 -
Vvi13g0681 599 SUPERFAMILY MFS general substrate transporter 27 565 IPR036259 -
Vvi13g0681 599 CDD MFS_Mch1p_like 26 551 - -
Vvi13g0681 599 FunFam Nodulin family protein 347 568 - -
Vvi13g0681 599 Pfam Nodulin-like 27 272 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0681 Vvi-Chr13 6815813 6817612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0681 6 577 Nodulin-like Gene Family AT2G39210 73.601 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0681 - - vvi:100266758 1113.6