Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0676 ATGGCGGTTGCAGGAACTGTGGCCAGTACTGGTTTTAATCGGGCTGACATGAGGAGTCTAGCCTTCCAAATCCTCACCGGCCGGTGGTTGATGGTGTTTGCAGCAATTCTTGTCATGTTTGCGGCTGCTTCAGCGACTTCCATGTTCGGCCTCTACTCAAGCGCAATCAAAGCCGCTCTGGGATATGATCAAACTACCCTCAATTTGCTCGGCTTTTTCAAGGACTTGGGAGCAAATGTTGGGGTTCTTTCTGGCCTCATCAATGAGGTCACACCACCATGGGTTGTGCTATCAATGGGTGCGGCTATGAATCTTTTCGGCTACTTAATGATATGGCTTGCAGTGTCGGGAAAAATGGCCAAACCCCGGGTCTGGCACATGTGTCTCTACATATGCATTGGCTCGAATTCTCAGGCTTTTGCCACCACTGGAGCACTTGTCACCTGCGTGAAGAACTTCCCTGAGAACCGAGGTGCGGTTTTGGGGATATTGAAGGGGTATCAGGGGGCACTAACTGGTGCAATTATCACACAGATGTACCATGCTTTCTATCGCAATGATGCAACGGCTCTCATTTTGTTTGTAGCTTGGCTTCCTGCAGCTGTATCTTTGGGGTTTCTTCCTGCTATTCGAATCATGAAGGTGGATCAGCGGAGAAATGAGCTCAAGGTCTTTTATAATTTCCTTTATATCTCTCTTGGCCTCGCAGGATTTCTCATGATTATAATTATAGTAGAGAAACAGATGAAGTTCACTCAGAGTGAATATGGTGGAAGCGTGGCTGTTGTCCTTTTCTTGCTCTTTCTTCCACTTGCTCTTGTTATAAAAGAAGAATTCGATCTTTGGAAGACGAAGAAACAAGCCCTGAATGAGCCTTCCCAGTTGAATATCATCACAGAGAGGTTGAATGCTGAGGATAAAGATGCTTCTTCACCTCCACCATCGCCACCACCTATGTCTGCAGCTGCAACAAGTTCACGCAACCAGTTACCCAGTCCACAGAAGCAAAATTCTTGTCTATCAAATGTTTTCCGACCACCCAAGAGAGGGGAGGACTACACCATACTTCAAGCCCTTTTCAGCTTCGACATGTTTCTTCTATTCTTAGCTACGATTTGTGGTGTTGGAGGGACTTTAACAGCAATAGACAACTTGGGACAGATTGGAACTTCACTGGGGTACCCGACTGACAGCCTAAGCACTTTCATATCGCTTATGAGCATATGGAACTATCTCGGAAGAGTGGTTGCTGGTTTCGTATCCGAAATCTTCTTAACCAAATACAAATTTCCTCGGCCTCTAATGCTGGCGCTCGTCCAACTCTTGGCATGCGCTGGTCATCTGCTCATGGCCTTCAACGTCCACAATGCTCTCTACTTAGCATGGATGATCATCGGGTTTTGCTTTGGTGCCCAATGGCCATTACTTTTCGCCATCATTTCTGAAATTTTTGGGCTCAAATATTACTCCACGTTGTACAATTTTGGCTCTGTGGCTAGCCCAATTGGTTCTTATCTGCTGAACGTGAGGGTGGCCGGATATCTATATGATAAAGAAGCAGAAAGGCAAATGGCAGCCACGGGGAGCCATAGGAAGCGTGGTGAGGAGCTGACTTGCATCGGGGCAGAGTGCTTCAAATTGGCTTTCCTCATAATAGCAGGGGTTACATTTTTTGGTACCCTTGCGTCGTTCATTCTTGTGCTTAGGACTCGCAAGTTCTACCGGAGTGACATTTACAAGAAGTTCCGAGAATAG 1755 0.4661 MAVAGTVASTGFNRADMRSLAFQILTGRWLMVFAAILVMFAAASATSMFGLYSSAIKAALGYDQTTLNLLGFFKDLGANVGVLSGLINEVTPPWVVLSMGAAMNLFGYLMIWLAVSGKMAKPRVWHMCLYICIGSNSQAFATTGALVTCVKNFPENRGAVLGILKGYQGALTGAIITQMYHAFYRNDATALILFVAWLPAAVSLGFLPAIRIMKVDQRRNELKVFYNFLYISLGLAGFLMIIIIVEKQMKFTQSEYGGSVAVVLFLLFLPLALVIKEEFDLWKTKKQALNEPSQLNIITERLNAEDKDASSPPPSPPPMSAAATSSRNQLPSPQKQNSCLSNVFRPPKRGEDYTILQALFSFDMFLLFLATICGVGGTLTAIDNLGQIGTSLGYPTDSLSTFISLMSIWNYLGRVVAGFVSEIFLTKYKFPRPLMLALVQLLACAGHLLMAFNVHNALYLAWMIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVAGYLYDKEAERQMAATGSHRKRGEELTCIGAECFKLAFLIIAGVTFFGTLASFILVLRTRKFYRSDIYKKFRE* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0676 584 FunFam Nodulin family protein 355 576 - -
Vvi13g0676 584 MobiDBLite consensus disorder prediction 321 341 - -
Vvi13g0676 584 MobiDBLite consensus disorder prediction 305 341 - -
Vvi13g0676 584 SUPERFAMILY MFS general substrate transporter 27 572 IPR036259 -
Vvi13g0676 584 Gene3D MFS general substrate transporter like domains 360 574 IPR036259 -
Vvi13g0676 584 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 577 - -
Vvi13g0676 584 CDD MFS_Mch1p_like 27 560 - -
Vvi13g0676 584 Pfam Nodulin-like 28 274 IPR010658 -
Vvi13g0676 584 Pfam Major Facilitator Superfamily 374 569 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0676 Vvi-Chr13 6689682 6691436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0676 15 584 Nodulin-like Gene Family AT2G39210 67.368 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0676 - - vvi:100256418 1118.61