Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0674 ATGGGTGATGCAGCAACGGTGGGAGGCGGCGGAGGCTGCTGTAGGTTCGCGTGGCAAGTCCTCCGTGGGGGGTGGTTCATGATACCCGCGGCGTTCTTGGTCATGGCGGGTGCCGGTGCAACTTACCTCTATGGAGTCTACTCCAAAGACATCAAAGCCAGGCTGGGCTACGATCAATCGACGCTCAATCTCTTGGCCTCGATGAAGGATCTGGGTGCCAATGTTGGTATCCCCGCGGGCCTTTTAGCGGAGGTGGCACCCACCTGGGTCGTCCTCCTCGTTGGCTCCATAATGAATTTCGGCGGATACTTTCTCATATGGCTCGCCGTCGTTGGAAAAATACCGAAACCGGCGGTGTGGCATATGTGCGTGTACATCTGCCTGGGAGCTAATTCCCAGAATTTCTCCAACACCGGTGCACTCGTCACCTGCGTCAAGAACTTCCCGGAGGCCCGAGGAATGATGTTGGGTCTCATGAAGGGTTTCGTGGGGTTGAGTGGAGCGCTGTTCACACAGCTCTACTATGCAATCTATGGGAACGACTCCACATCCATGATTCTTCTCATTGGGTGGCTTCCGTCGGTGATATCTATTGTTTTCCTTACCACTCTTAGGCCAATGAAGGCCTCCACTCATCCGCGTGTGCTCAATGTTTTGTATCAAAATATGTATGTGACCGTGGGTCTAGCTGCGTTTCTCATGGGCTTAATAATCGCTCAGAAACAAGTTCAATTCTCACAGACTGCCTATATTGGAAGCGCCATCGCTGTCATTGTCCTAATTTTACTGCCCTTTGGTATAGCTGTGAGGGAGGAGCTTCTCGTTTGGAGGGAGAAGAAGCAGCCAGTGGCAGCGCCCACTGATATTGTGATTGCGAAAGAGTCTAAGACATTGCCGGAAAGTCCTCAGACTGATACACAAAAGGAAAAAGAGGGGGCTACAGAGGAAATGCCATGCTATTCATGTACAAACGTCTGCAACAAGCCCAGTAGAGGCGAAGATTATTCCATCTTTCAGGCCCTTCTGAGTGCCGATATGATAATTATGTTCGTGGCTATGTGTTGCGGACTGGGCTGCAATTTAACCACAATGAACAACCTCGGCCAGATCGGGGAATCCTTAGGCTATAAAAAGAACACAATCGGCATCTCTGTCTCACTGGCCAGCATCTGGGGCTTTTTCGGGAGAGTTTTCACGGGATTCATATCTGAAACCCTACTCCTGAAGAAAAAAGTTCCCAGAACCCTTTTCATGACAATCTTCCTGCTATTGTCCGCCGTTGGTCAGCTCATGATCGCCTTCCCATTCCCTAATTCAGTGTACATTGCATCGCTGGTAGTCGGGTTCTCTCATGGAGCCCAATTGACACTGGTTTTCACCGTTGTGTCTGAGCTTTTCGGACTGAAGTACTACTCTACTCTCTTCAATTGCGGCCAACTTTCCGCCCCTCTGGGATCTTATGTCCTGAGTGTGCTAGTGGTGGGAAAGCTTTACGATAGAGAGGCTATAAAGCAGCTGGGGCAAAAGAGTGTGAAAAGATCAATGACCGAGGAATTGACATGCATTGGAACAAAATGTTACAAGATTTCTTATCTTATATTGGCTTGTACAAACGTCTTTGCAGCTTTCGTTTCGCTGATTCTGGTTTGTCGAACTAGGAAGTTCTACAGCGGGGATATCTATAAGAAGTTTAGAGGCGAGACGGAGAAGAATGAGAATGAAAAGGAAAAGGAAATGGCTGTGACTGCTGGCACCAGAAAGCAGCAAGAAGTGGCAGCAACGGATTAA 1788 0.4916 MGDAATVGGGGGCCRFAWQVLRGGWFMIPAAFLVMAGAGATYLYGVYSKDIKARLGYDQSTLNLLASMKDLGANVGIPAGLLAEVAPTWVVLLVGSIMNFGGYFLIWLAVVGKIPKPAVWHMCVYICLGANSQNFSNTGALVTCVKNFPEARGMMLGLMKGFVGLSGALFTQLYYAIYGNDSTSMILLIGWLPSVISIVFLTTLRPMKASTHPRVLNVLYQNMYVTVGLAAFLMGLIIAQKQVQFSQTAYIGSAIAVIVLILLPFGIAVREELLVWREKKQPVAAPTDIVIAKESKTLPESPQTDTQKEKEGATEEMPCYSCTNVCNKPSRGEDYSIFQALLSADMIIMFVAMCCGLGCNLTTMNNLGQIGESLGYKKNTIGISVSLASIWGFFGRVFTGFISETLLLKKKVPRTLFMTIFLLLSAVGQLMIAFPFPNSVYIASLVVGFSHGAQLTLVFTVVSELFGLKYYSTLFNCGQLSAPLGSYVLSVLVVGKLYDREAIKQLGQKSVKRSMTEELTCIGTKCYKISYLILACTNVFAAFVSLILVCRTRKFYSGDIYKKFRGETEKNENEKEKEMAVTAGTRKQQEVAATD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0674 595 CDD MFS_Mch1p_like 23 542 - -
Vvi13g0674 595 Gene3D MFS general substrate transporter like domains 211 565 IPR036259 -
Vvi13g0674 595 Pfam Nodulin-like 25 268 IPR010658 -
Vvi13g0674 595 Gene3D MFS general substrate transporter like domains 19 210 IPR036259 -
Vvi13g0674 595 MobiDBLite consensus disorder prediction 572 595 - -
Vvi13g0674 595 SUPERFAMILY MFS general substrate transporter 24 554 IPR036259 -
Vvi13g0674 595 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0674 Vvi-Chr13 6676940 6678727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0674 9 574 Nodulin-like Gene Family AT2G28120 58.554 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0674 - - vvi:100242799 1159.44