Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0649 ATGAATAATTCAGTCTCGGATCACAGCTTCTACATTGAGAGTGATGAAGAGGATGAAGAGAACATGTCCAACAGAGGCAATAATGATGGACATGATTCGGATTCCTCCCATTCTTCCACTGAAATTGAGCAGCAGAACAAACCCAGTTCTTACAATACTTCATGGCCTCAAAGTTACAGGCAATCTATTGATCTGTACAGTAGTGTACCGTCTCCAAGTATTGGGTTTTTGGGCACTCCGTCCCTGTCAAGATTAGGCAGTTCATTTCTTTCCTCATCACTAACAAGGAGACACACACCTGAAGTATTGTCTTCTTTGGTAAAACCTCTGCTGCCATCAGTAGCAGATGAGCAACAGGAGCAACAAAGGCGTAGTTCTCATTCGTTGCTTCCCCCAATTCCATCAAGAAGGTCTTATATAAAAAAGGCAGGTCTAGATCAAAAACCCCACAAGGTCTCACATGAAGTTCCAATTTCACGCCAGAGCTCATATGGACAGGCTGTGCTAAATGGGATGAATATATTGTGTGGAGTCGGAATTCTTTCTACTCCATATGCGGTGAAAGAAGGGGGATGGGTTGGACTATCAATACTGCTTATATTCGCATTGCTGTCATTCTACACTGGGATTCTCTTGCGTTACTGCTTGGATAGTGCTCCAGGGCTTGAAACTTACCCAGACATTGGCCAAGCTGCATTTGGTACTACAGGCCGATTTGCCATCTCGATAATACTATACGTGGAACTCTATGCTTGTTGTGTTGAATATATAATTCTGGAGAGTGATAATTTATCATCACTCTTTCCAAATGCCCATTTAAACTTCGGAGTCTTTCACTTAGGTTCACACCATCTATTCGCATTGATGACCGCCCTGGCTGTTCTTCCTACTGTCTGGCTCCGAGATCTCAGTGTTCTTAGTTACATCTCTGCTGGGGGAGTTGTTGCTTCGATATTGGTGGTCCTCTGCTTGTTTTGGGTTGGCCTAGTAGATCAGGTTGGCTTTCAAAGTGAAGGGACTGTACTGAACCTCACCAATCTTCCTGTTGCTATTGGTCTCTATGGCTACTGTTATTCAGGGCATGCTGTTTTCCCAAACATCTATACTTCAATGGCAAAACCAAGCCAATACCCATCAGTACTCTTAATTAGCTTTGCTATTTGTACTCTCTTATATGCTGGAGTTGCTGTGTTGGGATACCAAATGTTTGGAGAATCAACATTATCACAATTCACTCTTAACATGCCCCAAGATTTGGTTGCCTCTAAGATTGCAGTGTGGACAACGGTAGTTAACCCTTTTACCAAATATGCATTAACCATGTCTCCAGTAGCAATGAGTCTGGAAGAGTTGATCCCTTCAAACCAATCCAAATCTCACATGTATGCAATCCTCATTAGAACAGCCCTGGTGATCTCTACATTGCTTGTGGGCCTCACCGTTCCCTTCTTTGGTTTGGTGATGGCATTGATTGGATCTTTGCTCACAATGCTTGTAACTTTAATACTTCCATGTGCTTGTTTCCTAAGCATCTTGAGGGGAAAAATCACACGTTTTCAGGGATCACTCTGTATTCTGATTATTGCAGTGGGCGTTGTGTCTTCAGCCTTTGGAACTTACTCTGCCCTTGCCAAAATTATTGAGAAGTTGAGCTGA 1656 0.4293 MNNSVSDHSFYIESDEEDEENMSNRGNNDGHDSDSSHSSTEIEQQNKPSSYNTSWPQSYRQSIDLYSSVPSPSIGFLGTPSLSRLGSSFLSSSLTRRHTPEVLSSLVKPLLPSVADEQQEQQRRSSHSLLPPIPSRRSYIKKAGLDQKPHKVSHEVPISRQSSYGQAVLNGMNILCGVGILSTPYAVKEGGWVGLSILLIFALLSFYTGILLRYCLDSAPGLETYPDIGQAAFGTTGRFAISIILYVELYACCVEYIILESDNLSSLFPNAHLNFGVFHLGSHHLFALMTALAVLPTVWLRDLSVLSYISAGGVVASILVVLCLFWVGLVDQVGFQSEGTVLNLTNLPVAIGLYGYCYSGHAVFPNIYTSMAKPSQYPSVLLISFAICTLLYAGVAVLGYQMFGESTLSQFTLNMPQDLVASKIAVWTTVVNPFTKYALTMSPVAMSLEELIPSNQSKSHMYAILIRTALVISTLLVGLTVPFFGLVMALIGSLLTMLVTLILPCACFLSILRGKITRFQGSLCILIIAVGVVSSAFGTYSALAKIIEKLS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0649 551 MobiDBLite consensus disorder prediction 115 132 - -
Vvi13g0649 551 MobiDBLite consensus disorder prediction 39 55 - -
Vvi13g0649 551 FunFam Amino acid transporter AVT1A 160 549 - -
Vvi13g0649 551 MobiDBLite consensus disorder prediction 115 134 - -
Vvi13g0649 551 Pfam Transmembrane amino acid transporter protein 161 541 IPR013057 -
Vvi13g0649 551 MobiDBLite consensus disorder prediction 1 55 - -
Vvi13g0649 551 PANTHER OS05G0424000 PROTEIN-RELATED 171 532 - -
Vvi13g0649 551 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0649 Vvi-Chr13 6143300 6152806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0649 1 485 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.840 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0649 K15015 - vvi:100249618 1003.05