Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0640 ATGGCAGTCACCGGGCCACCGTCTCCCCAAACCCCAACTCCCACGCCCACCATCACCCCGCAGGAAACCGCCCCCATCGGAAACCCAATCTTCGCTAGAATCCGAATCGCCAACTCTTCTGATGTTCCCCACCTCCACAAGCTCATGTACCAGCACGCCGCCTCCCAGCGTCTTACCCACATATTTTCGGCCACTGAGTCTTCCCTCTCTGCCACTCTCTTCAACTCCCCACCCTTCCAATCCTTTACTGTCTTGCTCCTCGAAGTTTCCCCCACACCCTTCCCCGATGGCCCCGTCGGCTGCCATCCCCCCATCACCCGCATCGTCAATCTAGATCTCCCCATTGTCGATCCTGAATCTAAGGAGTTCGGGTCGGGGGGCGAAGCGGTGGTGGTAGGGTTCGTGCTTTTTTTCCCGAATTATGGGGTGTTCTTGGGGAAGCCAGGGTTCTATATAGAGAGTTTGTACACGAGGGAGTGTTACAGGAAGAAAGGGTTTGGGAAGATGCTGTTGTCGGCGGTGGCAGCTCAGGCGGTGAAGATGGGGTATGGGAAACTGGACTGGTGTGTGCTTGGTTGGAATGCGAATGCGTTTGGGTTCTACAAGAAGATGGGTGCTCAGGTTTTTGAGGAACTCAAGATGTGTAGGTTGACTTCCGACGCTCTTCAAGCTTACGAAAGTTTTAGTTAA 690 0.5449 MAVTGPPSPQTPTPTPTITPQETAPIGNPIFARIRIANSSDVPHLHKLMYQHAASQRLTHIFSATESSLSATLFNSPPFQSFTVLLLEVSPTPFPDGPVGCHPPITRIVNLDLPIVDPESKEFGSGGEAVVVGFVLFFPNYGVFLGKPGFYIESLYTRECYRKKGFGKMLLSAVAAQAVKMGYGKLDWCVLGWNANAFGFYKKMGAQVFEELKMCRLTSDALQAYESFS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0640 229 CDD NAT_SF 131 186 - -
Vvi13g0640 229 PANTHER DIAMINE N-ACETYLTRANSFERASE 32 226 - -
Vvi13g0640 229 Gene3D - 32 228 - -
Vvi13g0640 229 Pfam Acetyltransferase (GNAT) family 128 205 IPR000182 GO:0016747
Vvi13g0640 229 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 217 IPR016181 -
Vvi13g0640 229 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 71 229 IPR000182 GO:0016747
Vvi13g0640 229 MobiDBLite consensus disorder prediction 1 23 - -
Vvi13g0640 229 FunFam probable acetyltransferase NATA1-like 32 228 - -
Vvi13g0640 229 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0640 Vvi-Chr13 6006418 6007107 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi13g0640 Acetyltransf_1 4.2e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0640 K22883 - vvi:100249664 440.654