Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0638 ATGGCAGCCGCCGCGCCACCTCCTCCACCAACTCCAACGCCCACCCCACCCACAACATTGCCTGAGACTGGCCCCGTCGGAAATCCAATCTTCGCCAGAATCCGAATCGCTAACCCATCCGATGTTCGCCCCCTCCACAAGCTCATGTACCAGCTCGCCGTCTTCGAGCGCCTCCCCCACCTTTTCTCCGCCACTGAGTCCTCCCTTTCATCCAACCTCTTCAACACTCCTCCTTTCCAATCCTTCACCGTCTTCCTCCTTGAAGTCTCCCCCACACCCTTCCCTGACGCCCCTGTCGGCGCCCATCCTCCGATCACCCACGTCATCAATCTAGATCTCCCCATCGCAGACCCTGAATCGCAAGAATTCGGATCGGGCGGCGACGCCGTGGTGGCAGGGTTCGTGCTGTTTTTCCCAAATTATTCGACGTTCTTGGGGAAGCCAGGGTTCTATATAGAGGATTTGTATGTCAGGGATTGCTACAGGAGGAAAGGGTTTGGGAAGATGTTGTTGTCTGCGGTGGCAGCTCAGGCGGTGAAAATGGGGTATGGGAGAGTGGAGTGGTGCGTGCTTGATTGGAATGTGAATGCGATTAAGTTCTACGAAGAGATGGGTGCTCAGGTTCTTCAGGAATGGAGGATCTGTAGGCTGACTGGTGATGCTCTTCAAGCTTATGGAAATTGA 684 0.5512 MAAAAPPPPPTPTPTPPTTLPETGPVGNPIFARIRIANPSDVRPLHKLMYQLAVFERLPHLFSATESSLSSNLFNTPPFQSFTVFLLEVSPTPFPDAPVGAHPPITHVINLDLPIADPESQEFGSGGDAVVAGFVLFFPNYSTFLGKPGFYIEDLYVRDCYRRKGFGKMLLSAVAAQAVKMGYGRVEWCVLDWNVNAIKFYEEMGAQVLQEWRICRLTGDALQAYGN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0638 227 MobiDBLite consensus disorder prediction 1 26 - -
Vvi13g0638 227 FunFam probable acetyltransferase NATA1-like 32 227 - -
Vvi13g0638 227 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 74 227 IPR000182 GO:0016747
Vvi13g0638 227 CDD NAT_SF 128 187 - -
Vvi13g0638 227 PANTHER DIAMINE N-ACETYLTRANSFERASE 32 225 - -
Vvi13g0638 227 Gene3D - 32 227 - -
Vvi13g0638 227 MobiDBLite consensus disorder prediction 1 23 - -
Vvi13g0638 227 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 219 IPR016181 -
Vvi13g0638 227 Pfam Acetyltransferase (GNAT) family 129 205 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0638 Vvi-Chr13 5968793 5969476 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi13g0638 Acetyltransf_1 1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0638 K22883 - vvi:100251348 437.958