Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0621 ATGCGGACTCTACCGCTAGGAGTCTCACTGGTATCCCCTACCACCACCACAAGCACAGCCACCCCCATTAATTCTCCTCTCACCACCATCAAGAAACCGTCTAGGGTTTCTAATTTCCCCAAATCAGGGATTTGCAGAGCCAGTCAAGTGGCTGAGCTATTTCCAACGGTGTTGCCCGAGATTGTCGTTCGGGAGGCCAGGTTAGAGGACTGTTGGGAAGTGGCTGAGACTCATTGCAGCTCCTTTTTCCCTGAATATTCCTTCCCTTTAGACTTTGTCTTGAGGATTGACAGGCTGTTGGCAATGTTTGCGGGTTTCTCTCTACCAAATGGTTGCAGGAGAACTTGTTTGGTGGCTGTCATCGGTGGCTCTGCTGATGATACCTTCTTCCTCGGGAGTGAAGATTTCAAAATTGGAGGTTTTGATGGGAAATTCAGTTTTAACAAGGGGTATGTAGCTGGGATATTAACAGTGGATACTGTTGCTGATTTTCTACCAAGGAAAGGCCCGCTTCGCCAAAGAAGGAGTGGAATTGCTTACATATCAAATGTTGCAGTTCGGGAGACATTCAGGCGCAAGGGGATAGCCAAAAGGCTTATAGTAAAGGCAGAGGCTCAAGCTAGAAGCTGGGGCTGCAGAGCAGTTGCACTGCATTGTGATCTGAACAACCCTGGGGCTACGAAATTGTACAAAGGCCAAGGTTTCAAATGCATCAAGGTGCCAGAAGGAGCAAATTGGCCCCAACCCAAAACCTCTCCAGATATCCAGTTCGGCTTTATGATGAAGCTCCTAAACACCTCTAGTGCTGCTTAG 813 0.4822 MRTLPLGVSLVSPTTTTSTATPINSPLTTIKKPSRVSNFPKSGICRASQVAELFPTVLPEIVVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRIDRLLAMFAGFSLPNGCRRTCLVAVIGGSADDTFFLGSEDFKIGGFDGKFSFNKGYVAGILTVDTVADFLPRKGPLRQRRSGIAYISNVAVRETFRRKGIAKRLIVKAEAQARSWGCRAVALHCDLNNPGATKLYKGQGFKCIKVPEGANWPQPKTSPDIQFGFMMKLLNTSSAA* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0621 270 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 61 246 IPR016181 -
Vvi13g0621 270 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 61 266 IPR000182 GO:0016747
Vvi13g0621 270 Pfam Acetyltransferase (GNAT) family 150 235 IPR000182 GO:0016747
Vvi13g0621 270 CDD NAT_SF 177 218 - -
Vvi13g0621 270 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 21 268 - -
Vvi13g0621 270 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 61 262 - -
Vvi13g0621 270 Gene3D - 59 239 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi13g0621 Acetyltransf_1 1.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0621 - - vvi:100259928 530.406