Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0608 ATGGAAGCCAACAGAGGCCAGAATGGAATTCAACAATTGCTAGCTGTAGAACAAGAAGCTCAGCATATTGTCAATGCTGCCAGAAATGCAAAAATGGCTAGACTTAAACAGGCCAAAGAAGAGGCTGAGAAGGAGATTGCTGAATTCCGTGTTCGAATGGAAAAAGAATTTCAAAGAAAGGTTGCAGAGAGTAGTGGGGACTCTGGTGCTAATGTGAAACGCCTTGAGCTGGAAACGGATGCAAAGATCCAGAACCTGAAGGTGGAGGCTGCAAGAATTTCCCATGATGTTGTCCACATGCTTCTGAAGCATGTGAATACTGTGAGGACCTAA 333 0.4444 MEANRGQNGIQQLLAVEQEAQHIVNAARNAKMARLKQAKEEAEKEIAEFRVRMEKEFQRKVAESSGDSGANVKRLELETDAKIQNLKVEAARISHDVVHMLLKHVNTVRT* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0608 110 FunFam V-type proton ATPase subunit G 3 110 - -
Vvi13g0608 110 Coils Coil 25 59 - -
Vvi13g0608 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vvi13g0608 110 Gene3D - 2 110 - -
Vvi13g0608 110 NCBIfam V-type ATPase subunit G 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vvi13g0608 110 Pfam Vacuolar (H+)-ATPase G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0608 Vvi-Chr13 5554668 5555646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0608 1 109 Primary Pumps ATPases(2) AT3G01390 76.147 5.37e-46 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0608 K02152 - vvi:100251261 196.823