Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0511 ATGGCAAAAATTAGAGATAGAACTGAGGATTTCAAAGATGTGGTCCGCCAAACAGCACTTTCTTTGGGATATAACGAGTCCAAAATGGCATCCATACTGTCGTCTTTCATTATTCACAAACCTTTGCAAAGGACATCTTTTACCAAAGCTGCCCTAAAGACGCTTGAAAGCATCAGAACTTTGGAACAGTTCATCATGCAGCATCGGAAGGATTATGTTGATATGCACCGTACAACTGAACAGGAAAGAGATAGCATTGAACATGAAGTTACTATTTTTATTAAAGCATGTAAAGACCAAATAGATATTCTCAAGAATAGTATAAGTGGTGAAGAAGCTAACTCAAGGGGCTGGCTTGGCATTAGAGGTGATCATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTTTTGATTTTAAGTGAGAGGCTTCATTCAGTAACAGCCCAGTTTGATCAGCTAAGAGCTAGACGCTTTCAGGATGCGATTAATAGACGGATACCAAGAAAAAAAATGAACCGGGTGTCCAGTTCAAATGCTACAGAAATCCCTAAATCTATCAATTCAGAACTGAGGGAGCCTGATGAGCCTCAGCCAGAGCCTCTTAGAGTTCAACAACAACTCTTGGATGATGAAACACGTGCTCTTCAGGTAGAGTTGTCTAGCCTTCTAGATGCTGTTCAAGAAACAGAAACTCAGATGGTGGAGATGTCTGCATTGAATCACCTCATGTCCACCCATATTCTGCAACAAGCTCAACAGATAGAGCTTTTGTATGAGCAGGCAGTCGAAGCTACATCAAATGTGGAGCTTGGTAACAAAGAGCTGTCTCAAGCCATCCAGCGAAATAGCAGCAGCAGAACCTTTCTTTTGCTTTTTCTATTTGTACTTACCTTTTCAATCATCTTTCTTGATTGGTATAGTTAA 930 0.4054 MAKIRDRTEDFKDVVRQTALSLGYNESKMASILSSFIIHKPLQRTSFTKAALKTLESIRTLEQFIMQHRKDYVDMHRTTEQERDSIEHEVTIFIKACKDQIDILKNSISGEEANSRGWLGIRGDHSNADTIAHKHGVVLILSERLHSVTAQFDQLRARRFQDAINRRIPRKKMNRVSSSNATEIPKSINSELREPDEPQPEPLRVQQQLLDDETRALQVELSSLLDAVQETETQMVEMSALNHLMSTHILQQAQQIELLYEQAVEATSNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLDWYS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0511 309 SUPERFAMILY t-snare proteins 55 273 IPR010989 GO:0016020|GO:0016192
Vvi13g0511 309 Gene3D - 211 306 - -
Vvi13g0511 309 MobiDBLite consensus disorder prediction 173 202 - -
Vvi13g0511 309 Coils Coil 94 114 - -
Vvi13g0511 309 FunFam Syntaxin-81 like 212 306 - -
Vvi13g0511 309 PANTHER SYNTAXIN-18 1 309 - -
Vvi13g0511 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0511 65 309 SNARE and Associated Proteins AT1G51740 74.494 1.11e-113 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0511 K08492 - vvi:104881127 585.874