Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0453 ATGGCATCTCCTCTGTCAAGGCTTGGTCTCATCATTTGCACTCTGCTATTCATTAGCTGTCAAGCATCCGATGATGATCGAAAGGCCTATATTGTATACATGGGTGACCTTCCAAAGGATGATGTGATCTCTTCCCCATCATTGCTTCACACTAGCATGCTACAAGAAGCCATTGATAGTTCTAGTTCATCAGAATATCTACTCCACAGCTACAAGAAAAGCTTCAATGGCTTTGTCGCCAGTCTGACAGGGGAGGAGGTGAAGAAACTATCTAACATGGAGGGGATAGTGTCTGTGTTCCCAAATGAAAAGATGCAACTCTTCACAACAAGGTCATGGGACTTCATAGGCTTCCCCCAGGATGTTGAAAGAACAACTACTGAAAGTGATATCATTGTTGGAATAATTGACAGTGGGATCTGGCCTGAATCTGCTAGTTTCAATGCCAAAGGATTCAGTCCGCCACCAAGAAAATGGAAGGGCACTTGTCAAACCTCATCCAACTTCACTAGTTGCAACAATAAAATCATTGGAGCTAGATACTACCATACTGGTGCAGAAGTTGAACCAAATGAGTATGACTCACCAAGAGATTCAGATGGCCATGGGACACACACTGCATCCATAGTAGCTGGAGGCTTAGTTTCTGGGGCAAGCTTACTAGGCTTTGGGTCAGGAACAGCTAGAGGAGGGGTACCATCAGCCCGTATTGCAGTATATAAGGTATGTTGGTCTAAGGGTTGTTATAGTGCTGATGTCCTCGCAGCTTTTGATGATGCAATTGCCGATGGAGTTGATATAATTTCTGTTTCCTTGGGGGGATATTCCCCAAATTATTTCGAAAATCCAATTGCAATCGGAGCTTTCCATGCTCTGAAAAATGGGATTCTCACATCAACTGCTGTTGGTAACTATGGTCATAATCGTGCAACTATCACAAATTTGTGGCCTTGGTCTCTCTCAGTCGCTGCTAGCACCATTGACAGAAAGTTTGTGACCAAGGTGCAGTTGGGAAACAACCAGGTTTATGAGGGAGTCTCTATAAACACTTTCGAGATGAATGATATGTACCCCATCATCTATGGTGGAGATGCACAAAATACTACTGGAGGTAATAGTGAATATTCCAGCTTATGTGACAAGAACTCCTTGAACAAGTCTCTGGTAAATGGTAAAATTGTCCTCTGTGATGCACTCAATTGGGGGGAGGAAGCAACAACTGCTGGAGCAGTGGGCATGATAATGCGAGATGGAGCCCTCAAAGATTTTTCCTTGAGTTTTTCTTTACCTGCATCCTACATGGACTGGAGCAATGGTACTGAACTCGATCAGTACTTAAACTCAACTAGACCAACTGCAAAGATAAATAGGAGCGTCGAGGTTAAAGATGAATTGGCCCCATTTATAGTTTCATTTTCATCGAGGGGTCCCAACCTTATAACACGGGACATTCTCAAGCCCGACTTAAGTGCACCTGGAGTGAACATTCTAGCAGCATGGTCAGAAGCTTCAACTGTGACTGGAAAAGAATGGGATACAAGAGTAGTTCCATATAATATAATGTCTGGGACATCCATGGCTTGCCCACATGCTTCCGGGGCTGCTGCCTATATCAAATCATTTCACCCAACATGGTCTCCTTCTGCTATTAAGTCTGCTCTAATGACAACTGCTTCTCCTATGAGGGGTGAAATTAATACCGATCTGGAGTTTTCATACGGATCAGGGCAGGTAGATCCTGTAAAGGCCGCAAATCCCGGTTTGGTATATGATGCTGGCGAGACGGATTACATCAAATTTTTGTGTGGGGAAGGCTATGGCAATGCAAAGTTACAGCTGATAACTGGAGATAACACTAGCTGCTCTGCAGACACAAATGGAACTGTCTGGGCTTTAAACTACCCATCTTTTGCTGTATCTACCAAGTACAAGGTTAGCATTACTCGCAACTTCACAAGGACAGTCACCAATGTTGGAACACCGGCATCAACTTATAAGGCAAATGTAACTGTCCCTCCCAGACTATGTGTCCAAGTTGAACCAAGTATTCTTTCATTCAAATCCCTTGGCCAGAAGAAGACTTTCTCTGTCACAGTACGGGTGCCAGCACTAGATACAGCTATAATATCAGGCTCCTTGGTGTGGAATGATGGGGTTTACCAAGTGAGGAGCCCCATAGTTGCTTATCTTTACTAG 2196 0.4394 MASPLSRLGLIICTLLFISCQASDDDRKAYIVYMGDLPKDDVISSPSLLHTSMLQEAIDSSSSSEYLLHSYKKSFNGFVASLTGEEVKKLSNMEGIVSVFPNEKMQLFTTRSWDFIGFPQDVERTTTESDIIVGIIDSGIWPESASFNAKGFSPPPRKWKGTCQTSSNFTSCNNKIIGARYYHTGAEVEPNEYDSPRDSDGHGTHTASIVAGGLVSGASLLGFGSGTARGGVPSARIAVYKVCWSKGCYSADVLAAFDDAIADGVDIISVSLGGYSPNYFENPIAIGAFHALKNGILTSTAVGNYGHNRATITNLWPWSLSVAASTIDRKFVTKVQLGNNQVYEGVSINTFEMNDMYPIIYGGDAQNTTGGNSEYSSLCDKNSLNKSLVNGKIVLCDALNWGEEATTAGAVGMIMRDGALKDFSLSFSLPASYMDWSNGTELDQYLNSTRPTAKINRSVEVKDELAPFIVSFSSRGPNLITRDILKPDLSAPGVNILAAWSEASTVTGKEWDTRVVPYNIMSGTSMACPHASGAAAYIKSFHPTWSPSAIKSALMTTASPMRGEINTDLEFSYGSGQVDPVKAANPGLVYDAGETDYIKFLCGEGYGNAKLQLITGDNTSCSADTNGTVWALNYPSFAVSTKYKVSITRNFTRTVTNVGTPASTYKANVTVPPRLCVQVEPSILSFKSLGQKKTFSVTVRVPALDTAIISGSLVWNDGVYQVRSPIVAYLY* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0453 731 Pfam Subtilase family 129 574 IPR000209 GO:0006508|GO:0008236
Vvi13g0453 731 Gene3D - 601 730 - -
Vvi13g0453 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 108 IPR037045 -
Vvi13g0453 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Vvi13g0453 731 CDD Peptidases_S8_3 106 559 IPR034197 -
Vvi13g0453 731 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Vvi13g0453 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 727 IPR045051 -
Vvi13g0453 731 CDD PA_subtilisin_like 335 455 - -
Vvi13g0453 731 Pfam Fibronectin type-III domain 632 727 IPR041469 -
Vvi13g0453 731 Gene3D - 328 462 - -
Vvi13g0453 731 FunFam Subtilisin-like protease SBT1.5 130 341 - -
Vvi13g0453 731 SUPERFAMILY Subtilisin-like 107 588 IPR036852 GO:0004252|GO:0006508
Vvi13g0453 731 Gene3D Peptidase S8/S53 domain 130 597 IPR036852 GO:0004252|GO:0006508
Vvi13g0453 731 ProSiteProfiles Serine proteases, subtilase domain profile. 112 584 - -
Vvi13g0453 731 Pfam Peptidase inhibitor I9 30 107 IPR010259 -
Vvi13g0453 731 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Vvi13g0453 731 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Vvi13g0453 731 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0453 Vvi-Chr13 3900919 3904696 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0453 26 729 Subtilisin-like Serine Gene Family AT5G59100 48.743 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0453 - - vvi:100247847 1445.25