Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0450 ATGGAACTTCAGATGGAAAATGCCTCCCAATATCTCCTCCATAGCTACAAGAAGAGCTTCAACGGATTTGTCGCAAAGTTGACCGAGGAGGAGTCGAAGAAACTGTCCGGCATGGACGGGGTTGTGTCTGTGTTCCCAAATGGAAAGAAGAAACTCCTTACCACAAGGTCGTGGGACTTCATCGGCTTTCCCCTGGAAGCTAATAGAACAACTACTGAAAGTGACATTATTGTTGGAATGCTGGACACTGGGATCTGGCCTGAGGCTGATAGTTTCAGTGATGAAGGGTATGGTCCACCACCAACCAAATGGCAGGGCACTTGTCAAACCTCATCCAATTTCACCTGCAACAATAAAATCATTGGAGCTAGATACTACAGGAGTGATGGAAATGTACCCCCAGAAGATTTTGCATCACCAAGAGATACAGAAGGCCATGGGACACATACTGCATCCACAGCAGCTGGAAACGTAGTTAGTGGGGCAAGCTTACTGGGCCTTGGCGCAGGAACAGCTCGAGGAGGGACTCCTTCAGCCCGCATTGCAGTGTATAAGATATGTTGGGCAGATGGTTGTTATGATGCAGATATCCTTGCAGCATTTGATGATGCAATTGCGGATGGAGTTAATATTATCTCTCTTTCAGTTGGGGGATCCTTTCCTCTGGATTACTTTGAAGATTCAATTGCGATTGGAGCCTTCCATTCCATGAAGAATGGGATACTCACATCTAATGCTGGTGGTAATTCGGGTCCAGATCCTGGTTCAATTACAAATTTCTCGCCTTGGTCTCTCTCAGTTGCTGCTAGCGTCATTGACAGAAAGTTTCTGACCGCGTTGCACTTAGGAAACAACCTGACTTATGAGGGAGAACTCTCTCTAAATACTTTCGAGATGAATGGTATGGTCCCTCTCATTTATGGCGGGGATGCGCCAAACACGTCAGCAGGATCTGATGCATCTTATTCCAGGTACTGCTACGAGGGCACCTTGAACACGTCTCTGGTAACGGGTAAAATTGTATTCTGTGACCAGTTGAGTGATGGGGTGGGAGCAATGAGTGCTGGAGCAGTAGGTACTGTAATGCCAAGTGATGGCTACACAGATTTGTCCTTAGCTTTCCCCTTACCTACATCCTGCTTGGACTCCAACTATACTACCAACGTTCATGAGTACATCAACTCAACTAGCACACCAACCGCAAATATACAGAAGAGCACCGAGGCTAAAAATGAATTGGCACCGTTTGTAGTTTGGTTTTCGTCGAGGGGCCCAAACCCTATTACCCGTGACATTCTCAGTCCTGACATCGCCGCGCCAGGAGTTAATATTCTAGCAGCATGGACAGAAGCTTCAAGTTTGACAGGAGTTCCAGGGGATACAAGAGTAGTTCCATACAATATCATTTCAGGGACGTCCATGGCTTGTCCACATGCTTCCGGGGCTGCTGCCTACGTTAAATCATTTAACCCAACATGGTCTCCTGCTGCTATCAAGTCTGCCTTAATGACAACTGCTTCACCCTTGAGTGCTGAAACCAACACCGACCTGGAGTTTTCTTATGGGGCTGGTCAGTTGAATCCCCTACAGGCTGCAAATCCTGGTTTGGTGTATGATGCTGGGGAGGCAGATTACATCAAGTTCTTGTGTGGACAAGGCTATAACACTACAAAGTTGCACCTTGTCACGGGAGAAAACATCACTTGTTCTGCTGCCACAAATGGAACTGTTTGGGATTTAAACTACCCTTCTTTTGCTATATCCACTGAGCATGAGGCAGGAGTTAATCGCACCTTCACTAGAACTGTCACAAACGTCGGATCACCAGTCTCAACTTACAAGGCAATTGTGGTTGGCCCTCCAGAGTTCAGTATCAAAGTTGAACCAGGTGTACTTTCATTCAAATCCCTTGGGGAGACGCAAACCTTCACCGTCACTGTTGGTGTGGCAGCACTAAGTAACCCTGTAATATCAGGCTCTTTGGTGTGGGATGATGGGGTTTACAAAGTGAGGAGCCCCATAGTTGCTTATGTTTTTTAG 2040 0.4676 MELQMENASQYLLHSYKKSFNGFVAKLTEEESKKLSGMDGVVSVFPNGKKKLLTTRSWDFIGFPLEANRTTTESDIIVGMLDTGIWPEADSFSDEGYGPPPTKWQGTCQTSSNFTCNNKIIGARYYRSDGNVPPEDFASPRDTEGHGTHTASTAAGNVVSGASLLGLGAGTARGGTPSARIAVYKICWADGCYDADILAAFDDAIADGVNIISLSVGGSFPLDYFEDSIAIGAFHSMKNGILTSNAGGNSGPDPGSITNFSPWSLSVAASVIDRKFLTALHLGNNLTYEGELSLNTFEMNGMVPLIYGGDAPNTSAGSDASYSRYCYEGTLNTSLVTGKIVFCDQLSDGVGAMSAGAVGTVMPSDGYTDLSLAFPLPTSCLDSNYTTNVHEYINSTSTPTANIQKSTEAKNELAPFVVWFSSRGPNPITRDILSPDIAAPGVNILAAWTEASSLTGVPGDTRVVPYNIISGTSMACPHASGAAAYVKSFNPTWSPAAIKSALMTTASPLSAETNTDLEFSYGAGQLNPLQAANPGLVYDAGEADYIKFLCGQGYNTTKLHLVTGENITCSAATNGTVWDLNYPSFAISTEHEAGVNRTFTRTVTNVGSPVSTYKAIVVGPPEFSIKVEPGVLSFKSLGETQTFTVTVGVAALSNPVISGSLVWDDGVYKVRSPIVAYVF* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0450 679 MobiDBLite consensus disorder prediction 131 153 - -
Vvi13g0450 679 Pfam Fibronectin type-III domain 579 675 IPR041469 -
Vvi13g0450 679 CDD PA_subtilisin_like 282 403 - -
Vvi13g0450 679 Pfam Subtilase family 74 524 IPR000209 GO:0006508|GO:0008236
Vvi13g0450 679 SUPERFAMILY Subtilisin-like 58 533 IPR036852 GO:0004252|GO:0006508
Vvi13g0450 679 Gene3D Peptidase S8/S53 domain 75 545 IPR036852 GO:0004252|GO:0006508
Vvi13g0450 679 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 52 IPR037045 -
Vvi13g0450 679 Gene3D - 549 678 - -
Vvi13g0450 679 Pfam Peptidase inhibitor I9 7 49 IPR010259 -
Vvi13g0450 679 Gene3D - 273 410 - -
Vvi13g0450 679 FunFam Subtilisin-like protease SBT1.5 75 282 - -
Vvi13g0450 679 PRINTS Subtilisin serine protease family (S8) signature 470 486 IPR015500 -
Vvi13g0450 679 PRINTS Subtilisin serine protease family (S8) signature 73 92 IPR015500 -
Vvi13g0450 679 PRINTS Subtilisin serine protease family (S8) signature 142 155 IPR015500 -
Vvi13g0450 679 ProSiteProfiles Serine proteases, subtilase domain profile. 57 532 - -
Vvi13g0450 679 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 675 IPR045051 -
Vvi13g0450 679 CDD Peptidases_S8_3 50 507 IPR034197 -
Vvi13g0450 679 ProSitePatterns Serine proteases, subtilase family, serine active site. 471 481 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0450 Vvi-Chr13 3862446 3865381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0450 8 677 Subtilisin-like Serine Gene Family AT5G59190 49.408 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0450 - - vvi:100244417 1329.31