Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0449 ATGGTTAGGGTTGATGCCAAAAGGGCTCTGGTCGGGGCCAGGGCTCGAATCCTCTTCTACCCGACTCTTCTGTATAATGTGTTTTGGAACAAGATTCAGGCCGAGCTCAGATGGCGGGATGAAGTTGATCAACTCTCATCATTGGGGTTGGATGATAACTCCCATGTGGCTGTGAAGAAGGTAGATGGTAGAGGCCAAGCTGCTGAGAGGGAATTTGAGAATGAGGTGGAATTTCTCTCCTGGGTTATAGTAGTCAAGAGGAGTCAAAGTTTCTTGTTTATGAGTTGA 288 0.4722 MVRVDAKRALVGARARILFYPTLLYNVFWNKIQAELRWRDEVDQLSSLGLDDNSHVAVKKVDGRGQAAEREFENEVEFLSWVIVVKRSQSFLFMS* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0449 95 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 3 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0449 Vvi-Chr13 3849915 3851113 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0449 6 44 Protein tyrosine phosphatase (PTP) family AT5G56610 61.538 4.75e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0449 - - nnu:104588254 80.8777