Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0447 ATGAAGGGGGTAGTGTCTGTGTTCCCAAATGAAAAGAAGCAACTCCTAACAACAAGGTCATGGGACTTCATGGGCTTCCCCCAGAAAGTTACAAGAAATACTACTGAAAGCGATATTGTTGTTGGAATGCTCGATAGTGGGATCTGGCCTGAGTCTGCAAGTTTTAGCGATAAAGGATTTGGTCCACCACCAAGCAAATGGAAGGGCACTTGTGAAACCTCAACCAATTTCACTTGCAACAATAAAATCATTGGAGCTAGATACTACCGAAGTAGTGGTAGTGTACCAGAAGGAGAGTTTGAATCAGCAAGAGATGCTAATGGCCATGGCACACACACTGCATCCACAGCCGCTGGAGGCATAGTTGATGATGCAAGCTTGCTAGGCGTTGCCTCAGGAACAGCTAGAGGAGGGGTTCCCTCTGCCCGCATTGCAGTGTACAAGATATGTTGGTCTGATGGTTGCTTCAGTGCAGATATCCTTGCAGCATTTGATGATGCAATTGCTGATGGAGTTGATATTATCTCTCTCTCTGTTGGAGGATCCTCTCCCAATGATTACTTCCGAGACCCAATTGCTATTGGAGCTTTCCATTCTATGAAGAATGGGATTCTTACATCTAATTCTGCTGGTAATTCAGGTCCTGATCTTGCATCTATTACAAATTTCTCGCCTTGGTCTCTCTCTGTCGCTGCAAGTACCATTGACAGAAAGTTTTTGACCAAGTTGGTGTTGGGTGACAACCAGGTTTATGAGGATTCAATCTCTCTAAATACTTTTAAGATGAAGGATATGCACCCTATCATTTATGCTGGAGATGCACCAAATAGGGCAGGAGGTTTCACTGGGTCTGAATCCAGGCTTTGCACTGATGACTCCTTGGACAAGTCTCTGGTAACTGGAAAAATAGTATTCTGTGATGGGTCTAGTCGTGGACAGGCGGTACTGGCTGCCGGTGCAGCCGGTACTATAATTCCAGATGAAGGCAACGAGGGGAGAACTTTTTCTTTTCCTGTACCTACATCCTGCTTGGACACAAGTGATACAAGCAAAATTCAGCAGTACATGAACTCAGCTAGCAACGCCACTGCAAAAATAGAGAGGTCCATCGCCGTGAAAGAAGAATCGGCCCCAATTGTAGCTTCATTTTCATCTAGGGGCCCCAACCCCGTTACAACTGACATTCTCAGTCCCGACATAACTGCACCGGGAGTTCAAATTCTAGCAGCATGGACAGAAGCTTCACCTTTGACAGATGTACCAGGGGATAAAAGAGTAGCTAAATATAACATAATTTCAGGCACGTCCATGTCTTGCCCACATGCTTCTGGGGCTGCCGCCTACGTCAAATCATTTCATCCAACATGGTCTCCTGCTGCTATCAAGTCTGCTTTAATGACAACTGCTACTCCCATGAATGTTAAAACTAACACCGATCTGGAGTTCGCATACGGGGCGGGTCATCTAAATCCTGTAAAGGCTAGAAATCCTGGTCTAGTGTATGATACTGGAGCGGCAGATTACATCAAATTTTTGTGTGGACAAGGCTATAGCACTGAGAACTTGCGGCTTATCACGGGAGATGACAGTAGTTGCACAAAAGCCACAAATGGGACCGTTTGGGATTTGAACTATCCTTCTTTTACCCTAACTACTAGGGATGGAAAAACTGTTACGCGCACTTTTGCCAGGACAGTGACCAATGTTGGATCAGCAGTCTCAACTTACAAGGTAAAAGTGACTGCCTCTCCCGGACTCACTGTCAAAGTTGAACCAAGTGTCCTTTCATTCAAGTCCCTTGGCCAGAAGAAGACCTTCACCGTCACGGCTACGGCAGCAGGCGATGAACTTAAGCTAACTGGGTCTTTGGTCTGGGATGATGGGGGCGCTTTGGGTCAATTTCCTATAAAAGGTAGCTTGCATCAAAATACAAGCACTGTCACCTCAAGATTCTGGGACTATCCCCTTCCAGTGGGCAATATGGCAGTTCGATGCATGCAAATGTATATTGTGTACATGGGTGACCTTCCAAAAGGTCAAGTGTCGGTGTCATCCCTTCACGCTAACATGCTACAAGAAGTCACCGGCAGTAGTGCGTCTGAATATCTTCTCCATAGCTACAAGAGGAGCTTCAACGGGTTTGTCGCAAAGTTGACGGAGGAGGAGTCGAAGAAACTGTCCAGCATGGACGGGGTTGTGTCTGTGTTCCCAAATGGAAAGAAGAAACTCCTTACGACAAGGTCATGGGACTTCATCGGCTTCCCAGTTGAAGCTAATAGAACAACTACTGAAAGTGACATTATTGTTGGAATGCTGGACACTGGGATCTGGCCTGAGTCTGCTAGTTTCAGTGATGAAGGGTATGGCCCACCACCAACCAAATGGAAGGGCACTTGTCAAACCTCGTCCAATTTCACTTGCAACAATAAAATTATTGGAGCTAAATACTACCGGAGTGATGGAAAAGTACCTCGAAGGGATTTTCCATCACCAAGAGATTCAGAAGGCCATGGATCACACACTGCATCCACAGCAGCTGGAAACTTAGTTGGTGGGGCAAGCTTACTGGGCATTGGCACAGGAACAGCTCGAGGAGGGGCTCCTTCAGCCCGCATTTCAGTGTATAAGATATGTTGGGCAGATGGTTGTTATGACGCTGATATCCTGGCAGCATTTGATGATGCAATCGCCGATGGAGTTGATGTAATCTCTCTTTCTGTTGGGGGATTCTCTCCATTGGATTACTTTGAAGACTCAATTGCAATTGGAGCTTTCCATTCCATGAAGAGTGGGATACTCACATCTAATTCTGCTGGTAATTCGGGCCCAGATGCTGCTTCCATTACAAATTTCTCGCCTTGGTCTCTGTCAGTTGCTGCTAGCGTCATTGACAGAAAGTTTGTGACCCCCCTGCATTTGGGAAACAACCAGACTTATGGAGTACTCTCTTTAAATACTTTCGAAATGAATGATATGGTTCCTCTCATTTATGGTGGAGATGCGCCAAACACGTCAGCAGGTTATGATGGATCTTCTTCCAGGTACTGCTACGAGGATTCCTTGGACAAGTCTCTGGTAACTGGTAAAATTGTACTCTGTGATGAGTTGAGTCTTGGGGTCGGAGCATTGAGTGCTGGAGCAGTAGGTACTGTAATGCCACATGAAGGCAATACGGAATATTCCTTCAATTTCCCCATAGCTGCATCCTGCTTGGACTCCGTCTATACTAGCAATGTTCATGAGTACATAAACTCAACTAGCACACCAACCGCAAATATACAGAAGACCACCGAGGCCAAAAATGAATTGGCACCATTTGTAGTTTCGTTTTCGTCGAGGGGCCCAAACCCTATTACCCGTGACATTCTCAGTCCTGACATCGCCGCGCCAGGAGTTGACATTCTAGCAGCATGGACAGGAGCTTCAAGTTTGACAGGAGTTCCAGGGGATACAAGAGTAGTTCCGTACAATATCATTTCAGGGACGTCCATGGCTTGTCCACATGCTTCCGGGGCTGCTGCCTACGTCAAATCATTTCACCCAACATGGTCTCCTTCTGCTATCAAGTCTGCCATAATGACAACTGCTTCTCCCATGAGTGTTGAAACCAACACCGACCTGGAGTTTGCATATGGGGCAGGTCAGTTAAATCCCCTACAGGCTGCAAATCCTGGTTTGGTATATGATGCTGGAGCAGCAGATTACATCAAGTTTTTGTGTGGGCAAGGCTATAACGATACAAAGTTGCAGCTTATCACCGGAGACAACAGCACTTGCTCTGCAGCCACAAATGGAACTGTTTGGGATTTAAACTACCCTTCTTTTGCTGTATCTACTGAGCATGGGGCAGGTGTTATTCGCAGCTTCACTAGAACTGTCACAAACGTCGGATCACCGGTCTCAACTTACAAGGCAATTGTGCTTGGCCCTCCAGAACTCAGTATCCGAGTTGAACCAGGTGTACTTTCATTCAAATCCCTTGGAGAGACGCAAACCTTCACCGTCACTGTTGGTGTGGCAGCACTAAGTAGCCCTGTAATATCAGGTTCTTTGGTGTGGGATGATGGGGTTTACCAAGTGAGAAGCCCCATAGTTGCTTATCTTAATTAG 4110 0.463 MKGVVSVFPNEKKQLLTTRSWDFMGFPQKVTRNTTESDIVVGMLDSGIWPESASFSDKGFGPPPSKWKGTCETSTNFTCNNKIIGARYYRSSGSVPEGEFESARDANGHGTHTASTAAGGIVDDASLLGVASGTARGGVPSARIAVYKICWSDGCFSADILAAFDDAIADGVDIISLSVGGSSPNDYFRDPIAIGAFHSMKNGILTSNSAGNSGPDLASITNFSPWSLSVAASTIDRKFLTKLVLGDNQVYEDSISLNTFKMKDMHPIIYAGDAPNRAGGFTGSESRLCTDDSLDKSLVTGKIVFCDGSSRGQAVLAAGAAGTIIPDEGNEGRTFSFPVPTSCLDTSDTSKIQQYMNSASNATAKIERSIAVKEESAPIVASFSSRGPNPVTTDILSPDITAPGVQILAAWTEASPLTDVPGDKRVAKYNIISGTSMSCPHASGAAAYVKSFHPTWSPAAIKSALMTTATPMNVKTNTDLEFAYGAGHLNPVKARNPGLVYDTGAADYIKFLCGQGYSTENLRLITGDDSSCTKATNGTVWDLNYPSFTLTTRDGKTVTRTFARTVTNVGSAVSTYKVKVTASPGLTVKVEPSVLSFKSLGQKKTFTVTATAAGDELKLTGSLVWDDGGALGQFPIKGSLHQNTSTVTSRFWDYPLPVGNMAVRCMQMYIVYMGDLPKGQVSVSSLHANMLQEVTGSSASEYLLHSYKRSFNGFVAKLTEEESKKLSSMDGVVSVFPNGKKKLLTTRSWDFIGFPVEANRTTTESDIIVGMLDTGIWPESASFSDEGYGPPPTKWKGTCQTSSNFTCNNKIIGAKYYRSDGKVPRRDFPSPRDSEGHGSHTASTAAGNLVGGASLLGIGTGTARGGAPSARISVYKICWADGCYDADILAAFDDAIADGVDVISLSVGGFSPLDYFEDSIAIGAFHSMKSGILTSNSAGNSGPDAASITNFSPWSLSVAASVIDRKFVTPLHLGNNQTYGVLSLNTFEMNDMVPLIYGGDAPNTSAGYDGSSSRYCYEDSLDKSLVTGKIVLCDELSLGVGALSAGAVGTVMPHEGNTEYSFNFPIAASCLDSVYTSNVHEYINSTSTPTANIQKTTEAKNELAPFVVSFSSRGPNPITRDILSPDIAAPGVDILAAWTGASSLTGVPGDTRVVPYNIISGTSMACPHASGAAAYVKSFHPTWSPSAIKSAIMTTASPMSVETNTDLEFAYGAGQLNPLQAANPGLVYDAGAADYIKFLCGQGYNDTKLQLITGDNSTCSAATNGTVWDLNYPSFAVSTEHGAGVIRSFTRTVTNVGSPVSTYKAIVLGPPELSIRVEPGVLSFKSLGETQTFTVTVGVAALSSPVISGSLVWDDGVYQVRSPIVAYLN* 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0447 1369 CDD Peptidases_S8_3 13 470 IPR034197 -
Vvi13g0447 1369 Pfam Fibronectin type-III domain 542 630 IPR041469 -
Vvi13g0447 1369 Pfam Fibronectin type-III domain 1269 1365 IPR041469 -
Vvi13g0447 1369 CDD PA_subtilisin_like 973 1093 - -
Vvi13g0447 1369 PRINTS Subtilisin serine protease family (S8) signature 36 55 IPR015500 -
Vvi13g0447 1369 PRINTS Subtilisin serine protease family (S8) signature 433 449 IPR015500 -
Vvi13g0447 1369 PRINTS Subtilisin serine protease family (S8) signature 105 118 IPR015500 -
Vvi13g0447 1369 Gene3D - 236 373 - -
Vvi13g0447 1369 Gene3D - 964 1100 - -
Vvi13g0447 1369 Pfam Peptidase inhibitor I9 669 740 IPR010259 -
Vvi13g0447 1369 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 661 743 IPR037045 -
Vvi13g0447 1369 Pfam Subtilase family 765 1214 IPR000209 GO:0006508|GO:0008236
Vvi13g0447 1369 ProSitePatterns Serine proteases, subtilase family, serine active site. 1161 1171 IPR023828 -
Vvi13g0447 1369 SUPERFAMILY Subtilisin-like 743 1226 IPR036852 GO:0004252|GO:0006508
Vvi13g0447 1369 FunFam Subtilisin-like protease SBT1.5 38 245 - -
Vvi13g0447 1369 SUPERFAMILY Subtilisin-like 20 496 IPR036852 GO:0004252|GO:0006508
Vvi13g0447 1369 ProSiteProfiles Serine proteases, subtilase domain profile. 748 1222 - -
Vvi13g0447 1369 FunFam Subtilisin-like protease SBT1.5 766 972 - -
Vvi13g0447 1369 Gene3D - 512 639 - -
Vvi13g0447 1369 Gene3D - 1239 1368 - -
Vvi13g0447 1369 ProSitePatterns Serine proteases, subtilase family, serine active site. 434 444 IPR023828 -
Vvi13g0447 1369 CDD PA_subtilisin_like 243 366 - -
Vvi13g0447 1369 MobiDBLite consensus disorder prediction 822 845 - -
Vvi13g0447 1369 Pfam Subtilase family 37 487 IPR000209 GO:0006508|GO:0008236
Vvi13g0447 1369 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 669 1365 IPR045051 -
Vvi13g0447 1369 ProSiteProfiles Serine proteases, subtilase domain profile. 20 495 - -
Vvi13g0447 1369 Gene3D Peptidase S8/S53 domain 766 1235 IPR036852 GO:0004252|GO:0006508
Vvi13g0447 1369 Gene3D Peptidase S8/S53 domain 38 508 IPR036852 GO:0004252|GO:0006508
Vvi13g0447 1369 CDD Peptidases_S8_3 741 1197 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0447 Vvi-Chr13 3825365 3837200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0447 1 636 Subtilisin-like Serine Gene Family AT5G59100 48.068 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0447 - - gra:105775705 1570.44