Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0446 ATGGGGGATCTTCCGAAGGGTGGTGCTCTCTCCTTATCATCTTTCCACACTAATATGCTACAAGAAGTCGTCGGCAGTAGTAGTGCATCCAAATATTTACTCCACAGCTACAAGAAGAGCTTCAATGGATTTGTTGCGGAATTAACCAAGGAGGAGATGAAGAGACTGTCTGCCATGAAGGGGGTAGTGTCTGTGTTCCCAAATGAAAAGAAGCAACTCCTAACAACAAGGTCATGGGACTTCATGGGCTTCCCCCAAAAGGCTACAAGAAATACTACTGAAAGCGATATTGTTGTTGGAGTGCTCGATAGTGGGATCTGGCCTGAGTCTGCAAGTTTCAACGATAAAGGATTTGGTCCACCACCAAGCAAATGGAAGGGCACTTGTGATAGCTCAGCCAATTTCACTTGCAACAATAAAATCATTGGAGCTAGATACTACCGAAGTAGTGGAAGTATACCAGAAGGAGAGTTTGAATCAGCAAGAGATGCTAATGGCCATGGCACACACACTGCATCCACAGCCGCTGGAGGCATAGTTGATGATGCAAGCTTGCTAGGCGTTGCCTCAGGAACAGCTAGAGGAGGGGTTCCCTCTGCCCGCATTGCAGTGTACAAGATATGTTGGTCTGATGGTTGCTTCAGTGCAGATATCCTTGCAGCATTTGATGATGCAATTGCTGATGGAGTTGATATTATCTCTCTCTCTGTTGGAGGATCCTCTCCCAATGATTACTTCCGAGACCCAATTGCTATTGGAGCTTTCCATTCTATGAAGAATGGGATTCTTACATCTAATTCTGCTGGTAATTCAGGTCCTGATCTTGCATCTATTACAAATTTCTCGCCTTGGTCTCTCTCTGTCGCTGCAAGTACCATTGACAGAAAGTTTTTGACCAAGTTAGTGTTGGGTGACAACCAGGTTTATGAGGATTCAATCTCTCTTAATACTTTCAAGATGGAGGATATGCTCCCTATCATTTATGCTGGAGATGCACCAAATAAGGCAGGAGGTTTCACTGGGTCTGAATCCAGGTACTGCTACGAGGACTCCTTGGACAAGTCTCTGGTAACTGGAAAAATAGTATTATGTGACGAGACTAGTCAAGGACAGGCGGTACTGGCTGCCGGAGCAGCCGGTACCATAATTCCAGATGATGGCAACGAGGGGAGAACTTTTTCTTTCCCTGTACCTACATCCTGCTTGGACACAAGTAATATTAGCAAAATTCAGCAGTACATGAACTCAGCTAGCAATCCTACTGCAAAAATAGAGAGGTCCATGGCCGTGAAAGAAGAATCGGCCCCAATTGTAGCTTTATTTTCATCTAGGGGGCCCAACCCCATTACAAGTGACATTCTCAGTCCCGACATAACTGCACCGGGAGTTCAAATTCTAGCAGCATGGGCAGAAGCTTCACCTTTGACTGATGTACCAGGGGATGAAAGAGTAGCTAAATACAACATAATTTCAGGCACGTCCATGTCTTGCCCGCATGCTTCTGGGGCTGCCGCCTACGTCAAATCATTTCATCCAACATGGTCTCCTGCTGCTATCAAGTCTGCTTTAATGACAACTGCTACTCCCATGAATGTTAAAACTAACACCGATCTGGAGTTTGCATACGGGGCGGGTCATCTAAATCCTGTAAAGGCTGCAAATCCTGGTTTAGTGTATGATGCTGGAGCGGCAGATTACGTCAAATTTTTGTGTGGGCAAGGATATAGCACTGAGAACTTGAGGCTCATCACTGGAGATAGCAGCACTTGCACAAAAGCCACAAACGGGACTGTTTGGGATTTGAACTATCCTTCTTTTGCTCTATCTATTAGTGCTGGAGAAACCGTTACGCGCACTTTCACCAGGACGGTCACGAATGTTGGATCACCAGTCTCCACTTACAAGGTAAAAGTGACTGCCCCACCAGGACTCACGGTTAAAGTTGAGCCACCTGTCCTTACATTCAAGTCCGTCGGCCAGAGGCAGACCTTCACTGTCACAGCTACTGCAGCAGGCAATGAAAGTATTCTATCAGGGTCTTTGGTGTGGGATGATGGGGTTTTTCAAGTAAGAAGCCCCATTGTTGCTTTTGCTCCTGCATTTAAGTAA 2109 0.459 MGDLPKGGALSLSSFHTNMLQEVVGSSSASKYLLHSYKKSFNGFVAELTKEEMKRLSAMKGVVSVFPNEKKQLLTTRSWDFMGFPQKATRNTTESDIVVGVLDSGIWPESASFNDKGFGPPPSKWKGTCDSSANFTCNNKIIGARYYRSSGSIPEGEFESARDANGHGTHTASTAAGGIVDDASLLGVASGTARGGVPSARIAVYKICWSDGCFSADILAAFDDAIADGVDIISLSVGGSSPNDYFRDPIAIGAFHSMKNGILTSNSAGNSGPDLASITNFSPWSLSVAASTIDRKFLTKLVLGDNQVYEDSISLNTFKMEDMLPIIYAGDAPNKAGGFTGSESRYCYEDSLDKSLVTGKIVLCDETSQGQAVLAAGAAGTIIPDDGNEGRTFSFPVPTSCLDTSNISKIQQYMNSASNPTAKIERSMAVKEESAPIVALFSSRGPNPITSDILSPDITAPGVQILAAWAEASPLTDVPGDERVAKYNIISGTSMSCPHASGAAAYVKSFHPTWSPAAIKSALMTTATPMNVKTNTDLEFAYGAGHLNPVKAANPGLVYDAGAADYVKFLCGQGYSTENLRLITGDSSTCTKATNGTVWDLNYPSFALSISAGETVTRTFTRTVTNVGSPVSTYKVKVTAPPGLTVKVEPPVLTFKSVGQRQTFTVTATAAGNESILSGSLVWDDGVFQVRSPIVAFAPAFK* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0446 702 CDD PA_subtilisin_like 301 424 - -
Vvi13g0446 702 Pfam PA domain 347 392 IPR003137 -
Vvi13g0446 702 Pfam Fibronectin type-III domain 600 695 IPR041469 -
Vvi13g0446 702 PRINTS Subtilisin serine protease family (S8) signature 163 176 IPR015500 -
Vvi13g0446 702 PRINTS Subtilisin serine protease family (S8) signature 491 507 IPR015500 -
Vvi13g0446 702 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Vvi13g0446 702 Pfam Peptidase inhibitor I9 15 72 IPR010259 -
Vvi13g0446 702 Gene3D - 570 698 - -
Vvi13g0446 702 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 695 IPR045051 -
Vvi13g0446 702 SUPERFAMILY Subtilisin-like 73 557 IPR036852 GO:0004252|GO:0006508
Vvi13g0446 702 CDD Peptidases_S8_3 71 528 IPR034197 -
Vvi13g0446 702 ProSiteProfiles Serine proteases, subtilase domain profile. 78 553 - -
Vvi13g0446 702 FunFam Subtilisin-like protease SBT1.5 96 303 - -
Vvi13g0446 702 Pfam Subtilase family 95 545 IPR000209 GO:0006508|GO:0008236
Vvi13g0446 702 ProSitePatterns Serine proteases, subtilase family, serine active site. 492 502 IPR023828 -
Vvi13g0446 702 Gene3D Peptidase S8/S53 domain 96 566 IPR036852 GO:0004252|GO:0006508
Vvi13g0446 702 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Vvi13g0446 702 Gene3D - 294 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0446 Vvi-Chr13 3818267 3821279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0446 1 698 Subtilisin-like Serine Gene Family AT5G59100 48.732 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0446 - - vvi:100256451 1377.46