Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0445 ATGGGCAACATGGCTTCTCCTCTTTCATGGCTTCTCTTGATCACTCTCTCTTGCACTCTGCTTATATGCTGCAGCGCAACTTCTGAAGAAGATCCAAAGGAGTATATAGTGTACATGGGGGACCTTCCAAAGGGTGATATTTCAGCATCAACTCTTCATACTAACATGCTACAACAAGTGTTTGGCAGTAGAGCATCGGAATATCTACTCCACAGCTACCAGAGAAGCTTCAATGGGTTTGTCGCAAAGCTGACCATGGAGGAGAAGAAGAAACTCTCTGGGATAGAGGGGGTAGTGTCTGTGTTCCCAAATGGAAAGAAGCAACTCCACACGACAAGGTCATGGGACTTCATGGGCTTCCCCCAAAAAGTTAAAAGAACAACTACTGAAAGCGATATTATTATTGGAATGCTTGACACTGGGATCTGGCCCGAGTCTGCTAGTTTCAGCGACGAAGGATTTGGTCCACAACCAAGCAAATGGAAGGGCACTTGCCAAACCTCATCCAATTTCACTTGCAACAATAAAATTATAGGAGCTAGATACTATCGAACTGATGGAAAACTAGGGCCAACAGATATTAAATCACCAAGAGATTCACTTGGCCATGGGACACACACTGCATCCACAGCAGCTGGGCGCATGGTTAGAGGGGCAAGCTTACTAGGCCTTGGCTCAGGAGCAGCTAGAGGAGGGGTTCCCTCAGCCCGCATTGCAGTTTACAAGATATGTTGGCATGATGGTTGTCCCGATGCTGATATCCTTGCAGCATTTGATGATGCAATTGCGGATGGAGTTGATATTATCTCTCTTTCTGTTGGGGGATATGATCCTTACGATTATTTTGAAGATTCAATTGCAATTGGAGCTTTCCATTCCATGAAGAATGGGATACTCACATCTAACTCTGCTGGCAACACAGGTCCAGATCCTGCCACTATAACAAATTTTTCCCCTTGGTCTCTCTCAGTTGCTGCTAGCACCATTGACAGAAAGTTTGTGACCAAAGTCAAGTTGGGAAACAACAAGGTTTATGAGGGAGTCTCTGTAAATACTTTCGAGATGGATGATATGTACCCTATTATTTATGGTGGAGATGCCCCAAATACTACAGGAGGTTATGATAGTTCTTATTCAAGGTATTGCTATGAGGACTCCTTGGACAAGTCTTTGGTAGATGGTAAAATTGTACTGTGTGATTGGTTGACTAGTGGGAAGGCAGCCATTGCTGCCGGAGCTGTAGGTACGGTAATGCAAGATGGAGGTTACTCTGATTCTGCCTACATTTACGCGTTACCGGCATCCTACTTGGACCCAAGAGATGGTGGCAAAGTTCATCACTACTTAAATTCAACTAGCAAGCCCATGGCAATTATACAAAAGAGTGTTGAGGTTAAAGATGAATTGGCCCCATTTGTAGTTTCATTTTCTTCAAGGGGCCCCAACCCTATTACAAGTGACATTCTCAAGCCAGACTTAACTGCACCTGGCGTGGACATTCTTGCAGCATGGACAGAAGCTTCATCTGTAACAGGGAAAGAAGGGGATACAAGAGTAGTTCCATACAGTATAATTTCTGGGACATCCATGTCTTGTCCACATGCGTCTGCAGCTGCTGCCTATATCAAGTCATTTCACCCAACATGGTCTCCTGCTGCTATTAAGTCTGCTCTAATGACAACTGCTGCTCGCATGAGTGTTAAAACGAACACAGACATGGAGTTTGCATATGGGGCAGGCCATATAGATCCTGTAAAGGCTGTACATCCTGGTTTGATATATGATGCTGGAGAGGCAAATTATGTCAATTTTCTATGCGGGCAAGGCTATAGCACTAAGCACTTGCGGCTTATCACAGGAGATAAAAGCACTTGTTCTGCAACCATGAATGGGACAGTTTGGGATTTAAACTACCCTTCTTTTACTATATCTACTAAGTCTGGGGTTACTGTCACTCGCATTTTCACTAGAACTGTCACTAATGTTGGATCAGCCGTCTCAACTTACAAGGCAATTTTGGCGGTTCCTTCAGGACTTAGTGTCAAAGTTGAACCAAGCGTTCTTTCATTCAAATCCCTTGGCCAGAAGAAGACCTTCACTATGACGGTTGGTACAGCAGTAGATAAAGGTGTGATATCAGGTTCTTTGGTGTGGGATGATGGGATTCACCAAGTGAGGAGCCCCATTGTGGCTTTTGTCTCTTCCTAA 2208 0.4443 MGNMASPLSWLLLITLSCTLLICCSATSEEDPKEYIVYMGDLPKGDISASTLHTNMLQQVFGSRASEYLLHSYQRSFNGFVAKLTMEEKKKLSGIEGVVSVFPNGKKQLHTTRSWDFMGFPQKVKRTTTESDIIIGMLDTGIWPESASFSDEGFGPQPSKWKGTCQTSSNFTCNNKIIGARYYRTDGKLGPTDIKSPRDSLGHGTHTASTAAGRMVRGASLLGLGSGAARGGVPSARIAVYKICWHDGCPDADILAAFDDAIADGVDIISLSVGGYDPYDYFEDSIAIGAFHSMKNGILTSNSAGNTGPDPATITNFSPWSLSVAASTIDRKFVTKVKLGNNKVYEGVSVNTFEMDDMYPIIYGGDAPNTTGGYDSSYSRYCYEDSLDKSLVDGKIVLCDWLTSGKAAIAAGAVGTVMQDGGYSDSAYIYALPASYLDPRDGGKVHHYLNSTSKPMAIIQKSVEVKDELAPFVVSFSSRGPNPITSDILKPDLTAPGVDILAAWTEASSVTGKEGDTRVVPYSIISGTSMSCPHASAAAAYIKSFHPTWSPAAIKSALMTTAARMSVKTNTDMEFAYGAGHIDPVKAVHPGLIYDAGEANYVNFLCGQGYSTKHLRLITGDKSTCSATMNGTVWDLNYPSFTISTKSGVTVTRIFTRTVTNVGSAVSTYKAILAVPSGLSVKVEPSVLSFKSLGQKKTFTMTVGTAVDKGVISGSLVWDDGIHQVRSPIVAFVSS* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0445 735 Pfam Subtilase family 131 580 IPR000209 GO:0006508|GO:0008236
Vvi13g0445 735 Gene3D - 605 733 - -
Vvi13g0445 735 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vvi13g0445 735 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Vvi13g0445 735 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Vvi13g0445 735 Pfam Peptidase inhibitor I9 35 109 IPR010259 -
Vvi13g0445 735 SUPERFAMILY Subtilisin-like 109 592 IPR036852 GO:0004252|GO:0006508
Vvi13g0445 735 Gene3D Peptidase S8/S53 domain 132 601 IPR036852 GO:0004252|GO:0006508
Vvi13g0445 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 110 IPR037045 -
Vvi13g0445 735 Pfam Fibronectin type-III domain 635 730 IPR041469 -
Vvi13g0445 735 FunFam Subtilisin-like protease SBT1.5 132 343 - -
Vvi13g0445 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 730 IPR045051 -
Vvi13g0445 735 CDD Peptidases_S8_3 107 562 IPR034197 -
Vvi13g0445 735 CDD PA_subtilisin_like 337 459 - -
Vvi13g0445 735 Gene3D - 330 466 - -
Vvi13g0445 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Vvi13g0445 735 ProSiteProfiles Serine proteases, subtilase domain profile. 114 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0445 Vvi-Chr13 3804600 3808263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0445 31 735 Subtilisin-like Serine Gene Family AT5G59100 49.861 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0445 - - vvi:100258131 1389.4