Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0443 ATGATGTGGTTCGGTCTCAATACCCTTCTTTCTCCTCTCCCAGCCACTTTTCTCCTAGGCGGCCAGGCCCATCCTTTCTTTTTGCTCTCCCTAGGCACTTTTCTCCGGGGCCCACCGCACCTTTATGAGTATATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTGTCGGCGTCTGCCATTCACACCAACATGCTGGAGCAAGTCTTTGGCAGTGGTAGGGCATCAAGTTCTCTAGTTCGCAGTTACAAAAGGAGTTTCAATGGATTTGTAGCGAAGCTAACAGAGGAGGAAATGCAGCAAATGAAAGGCATGGACGGGGTGGTCTCGGTTTTCCCTAACGAAAAGAAACAGCTCCACACAACTAGGTCGTGGGATTTCGTGGGGTTTCCCCGACAAGTTAAAAGAACAAGTTTTGAAAGCGACATTATCATAGGAGTGCTTGACACTGGAATATGGCCAGAGTCTGACAGCTTCGATGATAAAGGATTTGGCCCACCGCCAAGGAAATGGAAGGGCACTTGCCACGGGTTTTCCAATTTCACTTGCAACAATAAAATTATTGGAGCCAAGTACTATAAGAGCGATGGAAAATTTAGCCCAAAAGATTTGCATTCCCCAAGAGATTCAGAAGGCCATGGGACACACACTGCGTCAACTGCGGCAGGGGATTTAGTCAGCATGGCAAGTCTAATGGGCTTTGGTTTAGGAACCGCACGGGGTGGGGTTCCATCAGCTCGGATAGCTGTGTATAAGACGTGTTGGTCTGATGGCTGTCATGATGCTGATATTCTTGCAGCATTTGATGATGCAATTGCTGATGGGGTTGATATAATATCTATTTCAGTTGGGGGTAAAACTCCCCAGAAATATTTTGAAGATTCTGCTGCAATCGGAGCTTTTCATGCAATGAAAAATGGGATACTAACATCAACTTCTGCTGGTAACGAGGGACCTCTCCTTGTTTCCGTCACAAATGTCTCGCCATGGTCTCTTTCCGTGGCTGCTAGCACCACATATCGGAAGTTCTTGACCAAGGTGCAACTAGGTGACAGGAAGGTTTATAAAGGAATTTCGATAAACACATTTGAGCTCCATGGCATGTATCCTTTGATTTATGGTGGGGATGGCCCGAATACTAGAGGAGGTTTTAGAGGGAACACATCCAGGTTTTGCCAAATAAACTCACTGAACCCAAATTTAGTGAAGGGTAAAATTGTCCTTTGCATTGGGCATCGCGGTGGGTCTGAAGCAGCATGGAGTGCATTCTTGGCAGGTGCCGTTGGGACTGTGATAGTGGATGGACTCCAACTCCCCAGAGATTTCAGCCGCATTTATCCCTTGCCTGCATCTCGCCTTGGTGCAGGAGATGGTAAAAGAATTGCCTACTACATCAGCTCAACAAGTAACCCAACTGCATCGATATTGAAGAGTATTGAGGTTAGTGACACATTGGCCCCATATGTACCCCCCTTCTCATCAAGGGGTCCAAACCCAATTACACACGACCTTCTCAAGCCAGATTTAACAGCCCCAGGTGTACACATTCTGGCTGCCTGGTCACCAATTTCTCCCATCTCTAAGGTACCTGGCGATAATCGAATAGCGGAATACAATATAGAATCCGGCACGTCAATGGCTTGCCCACATGCTACTGGGGCAGCTGCCTACATCAAGTCATTTCACCCCACCTGGTCTCCTGCTGCTATTAAGTCTGCTCTTATGACTACTGCTACTCCCATGAGTGCTAGAAAGAATCCGGAAGCCGAATTTGCATATGGTGCAGGCAATATTGATCCTGTAAGGGCTGTGCACCCTGGTCTAGTGTATGATGCCGATGAGATTGACTTCGTAAATTTTTTGTGCGGAGAAGGATATAGTGTTCAAAATCTACGGCTAGTCACCGGGGATCATAGTGTCTGTTCTAAAGCTACGAATGGAACCGTTTGGGATCTAAATTACCCGTCCTTTGCTCTTTCCATCCCCTACAAAGAATCAATCGCTCGCACGTTCAAAAGGAGTGTCACAAATGTTGGATTACCAGTATCCACATATAAAGCAACTGTTATTGGTGCCCCTAAGGGACTCAAAGTCAACGTTCAACCAAACATTTTATCATTCACATCCATCGGGCAGAAACTATCTTTTGTGTTGAAGGTTAAAGGACGGATAGTTAAAGACATGGTCTCTGCTTCGTTAGTGTGGGATGACGGTTTATATAAAGTGAGATCCCCCATTATTGTGTATGCAGTCCAATAA 2259 0.463 MMWFGLNTLLSPLPATFLLGGQAHPFFLLSLGTFLRGPPHLYEYIVYMGAKPAGDLSASAIHTNMLEQVFGSGRASSSLVRSYKRSFNGFVAKLTEEEMQQMKGMDGVVSVFPNEKKQLHTTRSWDFVGFPRQVKRTSFESDIIIGVLDTGIWPESDSFDDKGFGPPPRKWKGTCHGFSNFTCNNKIIGAKYYKSDGKFSPKDLHSPRDSEGHGTHTASTAAGDLVSMASLMGFGLGTARGGVPSARIAVYKTCWSDGCHDADILAAFDDAIADGVDIISISVGGKTPQKYFEDSAAIGAFHAMKNGILTSTSAGNEGPLLVSVTNVSPWSLSVAASTTYRKFLTKVQLGDRKVYKGISINTFELHGMYPLIYGGDGPNTRGGFRGNTSRFCQINSLNPNLVKGKIVLCIGHRGGSEAAWSAFLAGAVGTVIVDGLQLPRDFSRIYPLPASRLGAGDGKRIAYYISSTSNPTASILKSIEVSDTLAPYVPPFSSRGPNPITHDLLKPDLTAPGVHILAAWSPISPISKVPGDNRIAEYNIESGTSMACPHATGAAAYIKSFHPTWSPAAIKSALMTTATPMSARKNPEAEFAYGAGNIDPVRAVHPGLVYDADEIDFVNFLCGEGYSVQNLRLVTGDHSVCSKATNGTVWDLNYPSFALSIPYKESIARTFKRSVTNVGLPVSTYKATVIGAPKGLKVNVQPNILSFTSIGQKLSFVLKVKGRIVKDMVSASLVWDDGLYKVRSPIIVYAVQ* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0443 752 SUPERFAMILY Subtilisin-like 119 608 IPR036852 GO:0004252|GO:0006508
Vvi13g0443 752 CDD Peptidases_S8_3 117 579 IPR034197 -
Vvi13g0443 752 Gene3D - 340 482 - -
Vvi13g0443 752 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Vvi13g0443 752 ProSiteProfiles Serine proteases, subtilase domain profile. 124 604 - -
Vvi13g0443 752 Pfam Fibronectin type-III domain 651 748 IPR041469 -
Vvi13g0443 752 Gene3D Peptidase S8/S53 domain 142 617 IPR036852 GO:0004252|GO:0006508
Vvi13g0443 752 Gene3D - 621 751 - -
Vvi13g0443 752 CDD PA_subtilisin_like 347 475 - -
Vvi13g0443 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 40 120 IPR037045 -
Vvi13g0443 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 748 IPR045051 -
Vvi13g0443 752 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Vvi13g0443 752 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Vvi13g0443 752 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vvi13g0443 752 FunFam Subtilisin-like protease SBT1.5 142 351 - -
Vvi13g0443 752 Pfam Subtilase family 141 596 IPR000209 GO:0006508|GO:0008236
Vvi13g0443 752 Pfam Peptidase inhibitor I9 44 120 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0443 Vvi-Chr13 3771568 3779738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0443 48 752 Subtilisin-like Serine Gene Family AT5G59190 52.180 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0443 - - vvi:109123728 1429.46