Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0441 ATGGCTTGCCCACATGCTACTGGGGCAGCTGCCTACATCAAGTCATTTCACCCCACCTGGTCTCCTACTGCTATTAAGTCTGCTCTTATGACTATTGCTACTCCCATGAGTGCTAAAAAAAAAAATCCGGAAGCCAAATTTGCATATGGTGCAGGCAATATAGATCCTGGTCTGGTATATGATGCCGATGAGATTGACTATGTAAAATTTTTGTGTGGGCAAGGTTATAGTACTCGGGCTCTATGGCCGGGGGTAATTGTGTCTGTTCTACCGCTACAAATGGAACCGTTTGAAATCTAA 300 0.4433 MACPHATGAAAYIKSFHPTWSPTAIKSALMTIATPMSAKKKNPEAKFAYGAGNIDPGLVYDADEIDYVKFLCGQGYSTRALWPGVIVSVLPLQMEPFEI* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0441 99 Gene3D Peptidase S8/S53 domain 1 67 IPR036852 GO:0004252|GO:0006508
Vvi13g0441 99 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 80 IPR045051 -
Vvi13g0441 99 SUPERFAMILY Subtilisin-like 1 60 IPR036852 GO:0004252|GO:0006508
Vvi13g0441 99 ProSiteProfiles Serine proteases, subtilase domain profile. 1 60 - -
Vvi13g0441 99 Pfam Subtilase family 1 52 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0441 Vvi-Chr13 3765728 3766107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0441 1 81 Subtilisin-like Serine Gene Family AT5G59190 59.770 1.37e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0441 - - vvi:100259879 144.436