Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0438 ATGGCAAGAAAGAACTCTTTCCTCTGGCTTCTCCTTCTCAGTCTCATCTGTACTCTGGTCTGTACCCACAGTACTGCAGCAGCTTCGAAGGATGATGGTCGAAAGGAGTACATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTCTCGGCATCTGCCATTCACATCGACATGCTGCAGCAAGTCTTTGGCAGCAGTAGGGCATCAATTTCTCTGGTCCGCAGTTACAAAAGGAGTTTCAATGGATTTGTAGCGAAGCTCACAGAGGAGGAAATGCAGCAAATGAAGGGAATGGACGGGGTAGTCTCGATTTTTCCTAACGAAAAGAAACAGCTCCACACAACGAGGTCATGGGATTTCGTGGGGTTTCCCCAGCAAGTTAAAAGAACTAGTATTGAAAGTGACATAATAATAGGAGTGTTAGACAGTGGAATATGGCCAGAGTCTGACAGCTTCGATGATGAAGGATTTGGTCCACCGCCTAGCAAATGGATAGGGACTTGCCAAGGCTTTTCCAATTTTACTTGCAACAATAAAATTATTGGAGCCAAGTACTATCGGAGCAGTGGACAATTTAGGCAAGAAGATTTTCAATCCCCAAGAGATTCAGAAGGCCACGGGACACACACTGCATCCACTGCAGCTGGGGGCCTAGTTAGCATGGCAAGTCTCATGGGCTTTGGCTTAGGGACTGCTCGGGGCGGGGTTCCATCAGCTCGGATAGCTGTGTATAAGATATGTTGGTCTGATGGCTGTTTTGGTGCTGATATTCTCGCAGCATTTGATGATGCAATTGCTGATGGGGTTGATATAATCTCCATTTCAGTAGGGGGTAAAACTCCCACAAATTATTTTGAAGATCCAATTGCCATTGGAGCTTTTCACGCAATGAAAAAACGGATACTAACATCAGCTTCTGCTGGTAACGATGGACCTGTTCTTGCTTCCATCACAAATTTCTCGCCTTGGTCTCTTTCCGTGGCTGCTAGCACCATAGACCGGGATTTCTTCACCAAGGTGCAACTAGGCGACAGTAACGTTTTTGAGGGAGTTTCAATAAACACATTTGAGCTCAATGACATGTATCCTTTGATTTACGGTGGAGATGCCCCGAATACTGCAGCAGGTTTTAGTGGGAACAGATCTAGGTTTTGCTTTCCAAGCACATTGAACCCAAATTTAGTTAAAGGTAAAATTGTCCTTTGTGATGTGAAGACCAATGGGGCTGGCGCATTCTTGGCGGGTGCTGTTGGGGCTCTGATGGCAGATACACTCCCCAAAGATTCCAGCCGCAGTTTTCCCTTGCCTGCATCTCACCTTAGCGCACGAGATGGAAGCAGTATTGCCAACTACATCAACTCAACAAGTAACCCAACTGCATCAATATTCAAGAGTACTGAGGTTAGTGACGCATTGGCCCCATACGTAGTCTCCTTCTCATCAAGGGGTCCAAACCCAGCTTCATTCGACCTTCTCAAGCCTGACATAGCAGCCCCAGGAGTCCGCATTCTAGCTGCCTGGCCACCAATTGCTCCAGTTTCTGGAGTAAAAGGTGATAATCGAGAAGTGCTATACAATATAATTTCCGGGACGTCAATGTCCTGCCCACATGCTTCCGGGGCAGCTGCCTACATCAAGTCATTTAACCCCACCTGGTCTCCTGCTGCCATTAAGTCTGCTCTTATGACTACTGCTACTCCCATGAGTGCTAAAAAAAATCCGGAAGCCGAATTTGCATATGGTGCGGGCAATATAGATCCTGTAAAGGCTATAGATCCTGGTCTGGTATATGACGCCGATGAGATTGACTATGTAAAATTTTTGTGTGGGCAAGGTTATAGTACTCCGGCTCTACGGCTTGTCACCGGGGATAATAGTGTCTGTTCTGCAGCTACAAATGGAACCGTCTGGAATCTAAATTACCCTTCCTTTGCTCTTTCCAGCCTCACCAAGGAATCCATCACTGGCATGTTCAATAGGACTGTCACAAACGTTGGATCATCGGTGTCCACGTATAAAGCAACTGTTATAGGTGCTCCAGAGGGACTCGAAATCCAAGTTGAACCAAGCATTTTATCATTCACATCCCTCATGCAGAAGCTATCCTTTGTGTTGAAGGTTGAAGGAAAGGTAGAGAGAGAGAGGAGATTGGAAGGCTCCAGTATATATATGTATGCATGTCCAAGCACCACGAAGCCCATAGCTTACCATCATCTAATGGCAAGACAAAAAAACTCTTCTCTGTGGTTTCTCCTTCTCAGTCTCATCTGCAGTCTGCTCAGCACCCACAGTACTGCAGCAGCTTCCGAGGATGATGTTCGAAAGGAGTATATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTCTCGGCGTCTGTCATTCACACCAACATGCTGGAGCAAGTCTTTGGCAGCGATAGGGCATCAAGTTCTTTAGTCCGCAGTTACAAAAGGAGTTTCAATGGATTTGTAGCAAAGCTAACAGAGGATGAAATGCAGCAAATGAAAGGCATGGACGGGGTGGTCTCGGTTTTCCCTAGCGAAAAGAAACAGCTCCACACAACTCGGTCGTGGGATTTCGTGGGGTTTCCCCGACAAGTTAAAAGAACAAGTGTTGAAAGCGACATTATCATAGGAGTGCTTGACGGTGGAATATGGCCCGAGTCTGACAGCTTCGATGATAAAGGATTTGGCCCACCGCCAAGGAAATGGAAGGGCACTTGCCAAGGGTTTTCCAATTTCACTTGCAACAATAAAATTATTGGAGCCAAGTACTATAAGAGTGATAGAAAATTTAGCCCAGAAGATTTGCAATCCCCAAGAGATTCAGACGGCCACGGGACACACACTGCATCCACTGCAGCTGGGGGCCTAGTCAACATGGCAAGTCTCATGGGCTTTGGCTTAGGGACTGCTCGGGGCGGAGTTCCATCAGCTCGGATAGCAGTGTATAAGATATGTTGGTCTGATGGCTGTGATGATGCTGATATTCTCGCAGCATTTGATGATGCAATTGCTGATGGGGTTGATATAATCTCTTATTCACTTGGGAATCCCCCTTCCCAGGATTATTTTAAAGATACTGCTGCAATCGGTGCTTTTCATGCAATGAAAAATGGGATACTAACATCAACTTCTGCTGGTAACGATGGACCTCGCCTTGTTTCCGTCGTAAGTGTCTCGCCATGGTCTCTTTCCGTGGCTGCTAGCACCATAGATCGGAAGTTCTTGACCGAGGTGCAACTAGGTGACAGGAAGGTTTATAAGGGATTTTCGATAAACGCATTTGAGCCCAATGGCATGTATCCTTTGATTTATGGTGGGGATGCCCCGAATACTAGAGGAGGTTTTAGAGGGAACACATCCAGGTACTTATTATTAAAGAAAGAAAAACAATTCATTGAAAATGAAAACCGTACGTTAGAAATCCTGAATTTTAAAGCGTGTGTGATAGATTACAGGACTTTCATCACTGAAATGCAGGTTTTGCGAAAAAAACTCATTGAACCCAAATTTAGTGAAGGGTAA 3528 0.4595 MARKNSFLWLLLLSLICTLVCTHSTAAASKDDGRKEYIVYMGAKPAGDFSASAIHIDMLQQVFGSSRASISLVRSYKRSFNGFVAKLTEEEMQQMKGMDGVVSIFPNEKKQLHTTRSWDFVGFPQQVKRTSIESDIIIGVLDSGIWPESDSFDDEGFGPPPSKWIGTCQGFSNFTCNNKIIGAKYYRSSGQFRQEDFQSPRDSEGHGTHTASTAAGGLVSMASLMGFGLGTARGGVPSARIAVYKICWSDGCFGADILAAFDDAIADGVDIISISVGGKTPTNYFEDPIAIGAFHAMKKRILTSASAGNDGPVLASITNFSPWSLSVAASTIDRDFFTKVQLGDSNVFEGVSINTFELNDMYPLIYGGDAPNTAAGFSGNRSRFCFPSTLNPNLVKGKIVLCDVKTNGAGAFLAGAVGALMADTLPKDSSRSFPLPASHLSARDGSSIANYINSTSNPTASIFKSTEVSDALAPYVVSFSSRGPNPASFDLLKPDIAAPGVRILAAWPPIAPVSGVKGDNREVLYNIISGTSMSCPHASGAAAYIKSFNPTWSPAAIKSALMTTATPMSAKKNPEAEFAYGAGNIDPVKAIDPGLVYDADEIDYVKFLCGQGYSTPALRLVTGDNSVCSAATNGTVWNLNYPSFALSSLTKESITGMFNRTVTNVGSSVSTYKATVIGAPEGLEIQVEPSILSFTSLMQKLSFVLKVEGKVERERRLEGSSIYMYACPSTTKPIAYHHLMARQKNSSLWFLLLSLICSLLSTHSTAAASEDDVRKEYIVYMGAKPAGDFSASVIHTNMLEQVFGSDRASSSLVRSYKRSFNGFVAKLTEDEMQQMKGMDGVVSVFPSEKKQLHTTRSWDFVGFPRQVKRTSVESDIIIGVLDGGIWPESDSFDDKGFGPPPRKWKGTCQGFSNFTCNNKIIGAKYYKSDRKFSPEDLQSPRDSDGHGTHTASTAAGGLVNMASLMGFGLGTARGGVPSARIAVYKICWSDGCDDADILAAFDDAIADGVDIISYSLGNPPSQDYFKDTAAIGAFHAMKNGILTSTSAGNDGPRLVSVVSVSPWSLSVAASTIDRKFLTEVQLGDRKVYKGFSINAFEPNGMYPLIYGGDAPNTRGGFRGNTSRYLLLKKEKQFIENENRTLEILNFKACVIDYRTFITEMQVLRKKLIEPKFSEG* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0438 1175 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Vvi13g0438 1175 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Vvi13g0438 1175 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Vvi13g0438 1175 Pfam PA domain 363 447 IPR003137 -
Vvi13g0438 1175 CDD PA_subtilisin_like 340 462 - -
Vvi13g0438 1175 ProSiteProfiles Serine proteases, subtilase domain profile. 857 1175 - -
Vvi13g0438 1175 ProSiteProfiles Serine proteases, subtilase domain profile. 117 591 - -
Vvi13g0438 1175 Gene3D - 608 737 - -
Vvi13g0438 1175 SUPERFAMILY Subtilisin-like 852 1099 IPR036852 GO:0004252|GO:0006508
Vvi13g0438 1175 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Vvi13g0438 1175 Pfam Subtilase family 874 1071 IPR000209 GO:0006508|GO:0008236
Vvi13g0438 1175 SUPERFAMILY Subtilisin-like 112 595 IPR036852 GO:0004252|GO:0006508
Vvi13g0438 1175 CDD Peptidases_S8_3 850 1052 IPR034197 -
Vvi13g0438 1175 Gene3D Peptidase S8/S53 domain 135 604 IPR036852 GO:0004252|GO:0006508
Vvi13g0438 1175 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Vvi13g0438 1175 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 760 853 IPR037045 -
Vvi13g0438 1175 CDD Peptidases_S8_3 110 566 IPR034197 -
Vvi13g0438 1175 Gene3D - 1073 1114 - -
Vvi13g0438 1175 Gene3D - 333 469 - -
Vvi13g0438 1175 FunFam Subtilisin-like protease SBT1.5 875 1085 - -
Vvi13g0438 1175 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 718 IPR045051 -
Vvi13g0438 1175 FunFam Subtilisin-like protease SBT1.5 135 346 - -
Vvi13g0438 1175 Pfam Peptidase inhibitor I9 777 853 IPR010259 -
Vvi13g0438 1175 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Vvi13g0438 1175 Pfam Subtilase family 134 583 IPR000209 GO:0006508|GO:0008236
Vvi13g0438 1175 Pfam Fibronectin type-III domain 638 720 IPR041469 -
Vvi13g0438 1175 Gene3D Peptidase S8/S53 domain 875 1072 IPR036852 GO:0004252|GO:0006508
Vvi13g0438 1175 FunFam Subtilisin-like protease SBT5.3 25 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0438 Vvi-Chr13 3740333 3748574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0438 41 710 Subtilisin-like Serine Gene Family AT5G59190 51.923 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0438 - - vvi:100259879 1389.4