Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0382 ATGGGTGATGCAATTGATTTGACCGGGGACGGAGGAGTACTGAAGACAATTATAAAGCAAGCCAAACCTGATGCACTCACTCCAACAGAGAATCTCCCTCTTGTTGATGTGCATTATGAAGGCACTCTTGCAGAAACCGGTGGAGTTTTTGACACTACACATGAGGATAATACAGTGTTCTCATTTGAGCTTGGGAAAGGCACTGTAATTAAGGCATGGGACATTGCTTTGAAAACAATGAAGGTTGGGGAGGTTGCAAAAATCACTTGCAAGCCAGAGTACGCATACGGAGCTGCTGGTTCTCCACCAGATATCCCTGCAGATGCAACCCTTGTTTTTGAGGTGGAGTTGGTAGCCTGCAGGCCAAGGAAGGGTTCAAGCATCAGTAGTGTTTCTGATGAGAGGGCTAGGCTTGAAGAGCTCAAGAAGCAGAGAGAGATGGCTGCTGCAACCAAAGAAGAAGAAAAAAAGAGGAGAGAAGAAGCCAAAGCTGCTGCAGCTGCCCGTGTTCAAGCCAAGTTAGATGCCAAGAAAGGTCAGGGAAAGGGAAAGGGCAAAGGAAAATAG 567 0.4691 MGDAIDLTGDGGVLKTIIKQAKPDALTPTENLPLVDVHYEGTLAETGGVFDTTHEDNTVFSFELGKGTVIKAWDIALKTMKVGEVAKITCKPEYAYGAAGSPPDIPADATLVFEVELVACRPRKGSSISSVSDERARLEELKKQREMAAATKEEEKKRREEAKAAAAARVQAKLDAKKGQGKGKGKGK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0382 188 MobiDBLite consensus disorder prediction 142 188 - -
Vvi13g0382 188 FunFam Peptidylprolyl isomerase 1 120 - -
Vvi13g0382 188 Gene3D - 2 124 IPR046357 GO:0003755
Vvi13g0382 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Vvi13g0382 188 SUPERFAMILY FKBP-like 8 124 - -
Vvi13g0382 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 181 - -
Vvi13g0382 188 Coils Coil 131 165 - -
Vvi13g0382 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Vvi13g0382 188 MobiDBLite consensus disorder prediction 142 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0382 Vvi-Chr13 3235900 3242962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0382 6 146 Calmodulin-binding Proteins AT5G48570 32.484 1.14e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0382 K01802 - vvi:100241006 301.212