Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0323 ATGGCCGGAAATGGAGGGGCTCCGGTGATCGGAATCGATCTCGGCACGACGTTCTCGTGCGTCGGAGTGTGGCAGTACGATCATGTTGAAATCATTGCGAATGACCAGGGCAACAGAACGACGCCATCTTACGTTGCTTTCACTAATACGGAGCGGTTGATAGGAGATGCTGCAAAGAACCAGGTCGCTATGAACCCTGTCAACACTGTGTTTGATGCAAAGCGTCTGATTGGTCGGAGGTTCAGTGATGCCTCAATTCAGGATGATATAAAACTCTGGCCGTTCAAGGTCATTGGTGGTATTGGTGACAAACCCACAATTGTGGTCACTTACAAAGAAGAAGAGAAAAAGTTTACCGCTCAAGAGATTTCATCTATGGTCCTCTCAAAGATGCGTGAGATTGCTGAAGTCTACCTTGGTTCAACAGTGGATAAGGCAGTTGTCACTGTCCCTGCTTACTTCAGTGACTCTCAGCGCCAGGCAACAAAGGATGCTGGGGCTATTGCTGGTCTTGATGTCGTGCGCATCATCAATGAACCCACTGCTGCTGCCATTGCCTATGGCCTTGACAAGAAGGGAGGGGGTGGTGGCGAGAAGAATGTCCTTATCTTTGATCTTGGAGGTGGCACTTTTGATGTCTCCCTTCTCACAATAGAGGAAGGTCTATTTGAAGTGAGGGCCACTGCTGGAGACACCCATCTTGGAGGAGACGATTTTGACAACCGTATGGTGAACTATTTTGTACAGGAATTCAAGAGGAAGCACAAGATGGACATTAGTGGAAACCCCAGAGCACTTGAGAGGTTGAGAACTGCTTGTGAAAGAGCAAAGAGGACTCTCTCATCCACAGCTCAGACGAGCATTGAGATTGACTCCTTATATGAAGGTGTTGATTTCTACACAACCATCACTCGTGCTAGATTTGAAGATCTCAACATGAACCTCTTTAGAAAGTGCATGGAGCCTGTGGATAAGTGTTTGAGGGATTCTAAGATAGGCAAAAGCAGTGTCCAAGATGTTGTCCTCGTTGGTGGTTCTACTAGAATTCCAAAGGTGCAGCAAATGTTGCAAGACTTCTTTAATGGAAAGGAGCTTTGCAAGAGCATTAACCCAGATGAAGCTGTTGCTTATGGCGCTGCTGTGCAGGGTGCCATCTTAAGTGGAGAAGGTAATAAAAAGGTACAGGATCTGCTGCTCTTGGATGTTACTCCTCTGTCCCTTGGGTTGGAGACTGCTGGAGGTGTGATGACTGTACTGATTCCGAGGAACACCACTATTCCAACCAAGAAGGAGCAGGACTTTTCTACCTACTCAGACAACCAAACTAGTGTCTTGATCCAGGTCTATGAGGGTGAGAGAACAAGAAGTAGGGACAACAACTTGTTGGGCAAGTTTGAGCTTTCTGGCTTTGCTGCAGCCCCAAGGGGTGTACCTAAGATCACCGTTTGCTTTGATATTGATTCTAATGGTATCTTGAATGTCTCTGCGGAGGAGCAGACCACAGGGCAGAAGAACAAAATCACTATCACCAATGACAAAGGGAGATTGTCTAAGGAGGACATTGAGAAGATGATGCAGGAGGCTGAAAAGTACAAATCTGAGGATGAGATGCTCAAGAAGAAGGTGGAAGCAAAGAACGCCTTAGAGAATTATGCCTACAACGTAAGGAGCACTGTGAAGGATAAGAAGAATGAAGACAAGATCGCCCCTCTAGAAAAGAAAAAGATAGAGGATGCCGTGGAGGAGGTTATTCAGTGGTTGGATTCCAGCCAGTTTGCTGGGGCAGATGAGTTTGAGGACAAACTGAAGAAGTTTGAGGCCATCAGCAAACCAATCATTGGCAATATATATGAGGATACTGTACATCAGGTGGCTGATGGAGTTCTTGCTGCTGGTGGTCCTCCACCTGCTGCAAGTGCTGCCGTCCCAGTGGTTGAGGAAGTTGATTAA 1950 0.4677 MAGNGGAPVIGIDLGTTFSCVGVWQYDHVEIIANDQGNRTTPSYVAFTNTERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASIQDDIKLWPFKVIGGIGDKPTIVVTYKEEEKKFTAQEISSMVLSKMREIAEVYLGSTVDKAVVTVPAYFSDSQRQATKDAGAIAGLDVVRIINEPTAAAIAYGLDKKGGGGGEKNVLIFDLGGGTFDVSLLTIEEGLFEVRATAGDTHLGGDDFDNRMVNYFVQEFKRKHKMDISGNPRALERLRTACERAKRTLSSTAQTSIEIDSLYEGVDFYTTITRARFEDLNMNLFRKCMEPVDKCLRDSKIGKSSVQDVVLVGGSTRIPKVQQMLQDFFNGKELCKSINPDEAVAYGAAVQGAILSGEGNKKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQDFSTYSDNQTSVLIQVYEGERTRSRDNNLLGKFELSGFAAAPRGVPKITVCFDIDSNGILNVSAEEQTTGQKNKITITNDKGRLSKEDIEKMMQEAEKYKSEDEMLKKKVEAKNALENYAYNVRSTVKDKKNEDKIAPLEKKKIEDAVEEVIQWLDSSQFAGADEFEDKLKKFEAISKPIIGNIYEDTVHQVADGVLAAGGPPPAASAAVPVVEEVD* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0323 649 Coils Coil 266 286 - -
Vvi13g0323 649 FunFam Heat shock 70 kDa 391 545 - -
Vvi13g0323 649 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524|GO:0140662
Vvi13g0323 649 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Vvi13g0323 649 FunFam Heat shock protein 70 10 195 - -
Vvi13g0323 649 Gene3D - 10 384 - -
Vvi13g0323 649 Gene3D - 71 126 - -
Vvi13g0323 649 Gene3D - 545 618 IPR029048 -
Vvi13g0323 649 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 549 IPR029047 -
Vvi13g0323 649 Gene3D - 192 366 - -
Vvi13g0323 649 FunFam Heat shock 70 kDa protein 311 366 - -
Vvi13g0323 649 Pfam Hsp70 protein 9 617 IPR013126 GO:0005524|GO:0140662
Vvi13g0323 649 FunFam Heat shock 70 kDa 235 318 - -
Vvi13g0323 649 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 619 IPR029048 -
Vvi13g0323 649 Gene3D Actin; Chain A, domain 4 235 318 - -
Vvi13g0323 649 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Vvi13g0323 649 FunFam Heat shock 70 kDa protein 71 126 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 337 353 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 369 389 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 396 415 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 36 48 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 209 219 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 8 21 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 477 493 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 58 66 - -
Vvi13g0323 649 PRINTS 70kDa heat shock protein signature 146 166 - -
Vvi13g0323 649 FunFam Heat shock 70 kDa protein 196 260 - -
Vvi13g0323 649 Coils Coil 521 541 - -
Vvi13g0323 649 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Vvi13g0323 649 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Vvi13g0323 649 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vvi13g0323 649 CDD HSPA1-2_6-8-like_NBD 10 387 - -
Vvi13g0323 649 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0323 Vvi-Chr13 2720369 2723714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0323 1 649 Calmodulin-binding Proteins AT5G02490 77.642 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0323 K03283 - vvi:100261526 1217.99