Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0294 ATGGGCGAGGAGGATTACTCGTTGAGGGTGCAGATTATGCAGGCAATGCCAATTTTGGCGGTGGTTTTGTTGCAGTTTGGCTATGCAGGGTTAAGTATAATTGCAAAGTATGCACTAAACGCAGGGATGAACCACTACACTTTCGTCGTCTACCGCCATGTCATTGCAGCTGCTGTCATTGCTCCTTTTGCTATTGTCTTAGAAAGGAAAAGGTGGCCAAGGATGACTGTCTCCATCTTTGCAAAGATAATGCTGATGGGGTTACTAGAGCCTGTGATTGATCAGAACCTGTATTATGTGGGGATGAAGAACACAACTGCAACTTTTACCACTGCTATGAGCAATATTATTCCTGCATTCACATTTCTAGTAGCTTTGGTCCTCAGGCTAGAGAAGGTGAATCTGAGAAGACTGCATAGCCAGGCAAAGGTGGTGGGGACATTGGTAACAGTGGGGGGAGCTATGCTTATGACACTGGTTAAAGGGCCTGCACCAGACCTGCCATGGACTAAAGGAAGACACTATCATCAATCTTCTACTAGTCAGCAACAACATCCCATTAAAGGTGCCCTCATGATCACAGCAGGCTGTGTATGCTGGGCATGTTTCCTGAATCTACAAGCACGTACGGTGAAGTCATATCCAGCTCAGCTCTCCCTCACCACTTTGATATGTCTGATGGGGGCTCTTGAAGGTGCCATGGTCACCCTTATTATTGAACACGGCAATGCCTCAATCTGGGTTATACCCAAGGGTCCTACACTATGTGCTGTTCTCTATGGTGGGATAGTGTGTTCAGCCATTGCTTATTACATTCAAGGAGTGATAATGGGAGAAAAGGGACCGGTTTTTGTGTCGTCTTTTAATCCTCTGAGCATGATTATTGTTGCCATTCTGAGCTCCTTCATTTTTGCTGAGGCACTCTACTTGGGAATGTAA 939 0.4579 MGEEDYSLRVQIMQAMPILAVVLLQFGYAGLSIIAKYALNAGMNHYTFVVYRHVIAAAVIAPFAIVLERKRWPRMTVSIFAKIMLMGLLEPVIDQNLYYVGMKNTTATFTTAMSNIIPAFTFLVALVLRLEKVNLRRLHSQAKVVGTLVTVGGAMLMTLVKGPAPDLPWTKGRHYHQSSTSQQQHPIKGALMITAGCVCWACFLNLQARTVKSYPAQLSLTTLICLMGALEGAMVTLIIEHGNASIWVIPKGPTLCAVLYGGIVCSAIAYYIQGVIMGEKGPVFVSSFNPLSMIIVAILSSFIFAEALYLGM* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0294 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Vvi13g0294 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 309 - -
Vvi13g0294 312 PANTHER WAT1-RELATED PROTEIN 16 310 IPR030184 GO:0016020|GO:0022857
Vvi13g0294 312 Pfam EamA-like transporter family 188 309 IPR000620 GO:0016020
Vvi13g0294 312 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0294 Vvi-Chr13 2519814 2521418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0294 17 311 Nodulin-like Gene Family AT2G39510 59.933 3.04e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0294 - - vvi:100247871 597.43