Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0283 ATGAAGGCTGCAAGAGAAACACGGGCCCTTAAAGAAGCTAAGGACAAGCTACAAAAACGGGTGGAGGAATTTACATGGAGATTGCAGTTGGAGAAGCGATTAAGGGATTCAAGTCTTGCCCTTTCTTCTCCACGGGAACCTCAATCTGAGGAAAAGCCCCAGAAATCTCTCATTGAAAAGCAGCAGGAAAACCAAGACCTGCTAATCAATGTATTTGATCGTATCATTCAGACAATAGGTGCAGCAATAGAGGGGCTTCGTGCATCTCCACAAAGTGCTGGGTTCTCATTTCTTAATGGTCGGGTGCTTGGTGGACTGGATGACTTGAGACAAGTTGAAGCCAAATATGCAGCTTTTCTTTTTAAACAGCAACTCACAACCTTCCTTGAGAATAGATATGGAATGATAAGAGACAATTTAAAGAAATATTTCCCCATTGCTTGGATTGTGTATTCAGGAAATTCTTCTTAG 471 0.4204 MKAARETRALKEAKDKLQKRVEEFTWRLQLEKRLRDSSLALSSPREPQSEEKPQKSLIEKQQENQDLLINVFDRIIQTIGAAIEGLRASPQSAGFSFLNGRVLGGLDDLRQVEAKYAAFLFKQQLTTFLENRYGMIRDNLKKYFPIAWIVYSGNSS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0283 156 Coils Coil 3 23 - -
Vvi13g0283 156 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0283 Vvi-Chr13 2445082 2446291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0283 3 35 Myosins gene family AT5G20490 81.818 2.36e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0283 K10357 - vvi:100266890 134.806