Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0257 ATGGAGATATCGTACGCCTCCTCTAGCTCCCGCAACCTCTCTCGCTACTCCACCTCGACCTCCTCCTCCTCCAATATGCCGAACCGCCCTGTTAGGATTATTCAGCTGCAGCATCCCACGACGACGTCGCTTTCGAGTTCTTCGTCGTCGTCGTCGTCGTGGTGGTCTGTGCTTTCGAGATGGCGGTCCAAGGTCAATGCTATGAGCTTCACTGACTGGACCGACGTTTTAGTCCCTTGCTCCAGATGGATTCGAACCTACCGGTGGAGGGATTACCTCCAGATCGATCTCGCCGCCGGGTTAACCGTGGGCGTCATGCTCGTTCCTCAGGCAATGTCTTATGCAAGGTTAGCTGGGCTTGAACCAATATATGGACTTTACTCCAGTTTTGTGCCTATATTTGTGTATGCAATATTTGGGTCATCTCGCCAGCTTGCAATCGGTCCTGTAGCATTGGTTTCACTACTGGTCTCTAATGTATTAAGTAAAATTGTTGATTCATCTGATGAACTATACACGGAACTAGCAATACTTTTGGCGCTTATGGTTGGCATAATGGAATGCATAATGGGGCTCCTGAGGCTTGGATGGCTTATTCGTTTCATCAGTCACTCTGTGATTTCTGGGTTTACGACAGCTTCAGCAATTGTGATTGCCTTATCTCAAGCAAAGTATTTCCTGGGATATGATATAGATCGAACTAGCAAAATTGTGCCTCTGATTAAAAGTATAATAGCTGGAGCAGATGAGTTCTCCTGGCCTCCTTTCGTAATGGGATCCATCATTCTTGCAATTCTTCTGGTTATGAAGCACTTGGGAAAAACAAGGAAATATTTGCGGTTCCTTCGAGCATCAGGTCCCCTCACAGGAGTTGTCTTGGGCACTGTTTTTGTGAAAATATTTCATCCATCTTCAATTTCTGTGGTTGGAGAAATACCTCAGGGCCTCCCAAAATTTTCTGTTCCTAAAAGTTTTGGGTATGCAAAGGATTTGATTCCGACTGCACTTCTTATTACTGGTGTAGCTATATTGGAATCTGTGGGGATTGCCAAAGCATTGGCAGCGAAGAACGGGTATGAGCTGGATTCGAATCAAGAGTTGTTTGGTCTTGGTGTTGCCAATATCTGTGGTTCATTCTTTTCAGCATACCCCACGACAGGCTCCTTTTCTAGGTCGGCTGTAAATCATGAAAGCGGAGCAAAAACTGGATTATCTGGAATTGTTACAGGAATCATAATAGGCTGTGCTCTTTTGTTTCTGACTCCATTATTTACAGATATACCCCAGTGTGCTCTGGCTGCCATCGTGGTCTCAGCTGTAATGGGTTTGGTGGATTATGATGAAGCTATTTTTTTATGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCCTTACCAGCACTATGACATTGTTCCTTGGTATTGAGATTGGTGTCCTTGTTGGGGTTGGTGCTTCGCTTGCTTTTGTCATCCATGAGTCAGCAAATCCTCGTCTTGCTTTCTTGGGGCGTCTTCCAGGCACCACTGTTTATAGAAACATTCAGCAATATCCAGAAGCATATACATACCATGGGATTGTGATTGTTCGGATTGATGCACCCATTTATTTTGCAAATATAAGTCACATAAAAGAAAGGCTACAGGAATATGAAATGAAAAATGACGGATCTACAAGACGTGGACCAGAAGTTGAAAGTGTTTATTTTGTGATTCTAGAGATGTCACCTGTTACATATGTAGACTCCAGTGCCGTTCAAGCTTTGAAGGACTTGTATCACGAGTACAAATCACGGGATATCCAGATTGCCATTTCCAATCCAAACCGTGAAGTTCTGCTGACCCTAGCAAAGGCCAATTTGGTGGAGCTGATTGGTAAGGAGTGGTACTTTGTAAGGGTGCATGACGCTGTTCAAGTTTGCCTTCAACATGTGCAAAGCATAAATGAAGGAGCTAAGACAGCAGAGCCACTAGAGGAGGATAAACCGAGCCTCTTCCAGCGGTTGCTTAAACAGAGACGGGAGGACTTCTCAAAGGCCGAATTGGAGTCCGGAGATCAAGCTCCTTCGACTCCCGCTGATTCAGATTCGCAATTGGAGCCATTGTTGTCTCGCAAGTCTTGA 2121 0.4488 MEISYASSSSRNLSRYSTSTSSSSNMPNRPVRIIQLQHPTTTSLSSSSSSSSSWWSVLSRWRSKVNAMSFTDWTDVLVPCSRWIRTYRWRDYLQIDLAAGLTVGVMLVPQAMSYARLAGLEPIYGLYSSFVPIFVYAIFGSSRQLAIGPVALVSLLVSNVLSKIVDSSDELYTELAILLALMVGIMECIMGLLRLGWLIRFISHSVISGFTTASAIVIALSQAKYFLGYDIDRTSKIVPLIKSIIAGADEFSWPPFVMGSIILAILLVMKHLGKTRKYLRFLRASGPLTGVVLGTVFVKIFHPSSISVVGEIPQGLPKFSVPKSFGYAKDLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANICGSFFSAYPTTGSFSRSAVNHESGAKTGLSGIVTGIIIGCALLFLTPLFTDIPQCALAAIVVSAVMGLVDYDEAIFLWRVDKKDFLLWTLTSTMTLFLGIEIGVLVGVGASLAFVIHESANPRLAFLGRLPGTTVYRNIQQYPEAYTYHGIVIVRIDAPIYFANISHIKERLQEYEMKNDGSTRRGPEVESVYFVILEMSPVTYVDSSAVQALKDLYHEYKSRDIQIAISNPNREVLLTLAKANLVELIGKEWYFVRVHDAVQVCLQHVQSINEGAKTAEPLEEDKPSLFQRLLKQRREDFSKAELESGDQAPSTPADSDSQLEPLLSRKS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0257 706 SUPERFAMILY SpoIIaa-like 518 640 IPR036513 -
Vvi13g0257 706 CDD STAS_SulP_like_sulfate_transporter 517 633 - -
Vvi13g0257 706 Pfam Sulfate permease family 93 466 IPR011547 GO:0016020
Vvi13g0257 706 ProSiteProfiles STAS domain profile. 516 640 IPR002645 -
Vvi13g0257 706 PANTHER SULFATE TRANSPORTER 59 648 IPR001902 GO:0016020|GO:0055085
Vvi13g0257 706 FunFam Sulfate transporter 31 496 643 - -
Vvi13g0257 706 Gene3D STAS domain 496 644 IPR036513 -
Vvi13g0257 706 Pfam STAS domain 517 636 IPR002645 -
Vvi13g0257 706 NCBIfam sulfate permease 79 636 IPR001902 GO:0016020|GO:0055085
Vvi13g0257 706 MobiDBLite consensus disorder prediction 683 699 - -
Vvi13g0257 706 MobiDBLite consensus disorder prediction 1 28 - -
Vvi13g0257 706 MobiDBLite consensus disorder prediction 677 706 - -
Vvi13g0257 706 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0257 Vvi-Chr13 2221534 2235922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0257 28 648 Inorganic Solute Cotransporters AT5G13550 75.362 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0257 K18059 - vvi:100262061 1306.2