Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0229 ATGGAAGCTTTGAATTTAAGCTACTGCTCCTGCGTTGGTTCGTCACGTCTGACGTCTTCACGAGATCTTTTAAACTCCTTTTGTCTTTCTACCAAGAAGAAAATCACAATCAAATTCTCTAACACAGGCGCTTTTTCGCTTAAGAATCAAGCTTTCATTTCATTGAGAAGACCCAGAAGTAGAACAATATCAGCAGCAATGGCAACTGGAAGTGTGAGAGAGGTTCTTCCACCAGCTCTTGATTCTACCTCAGAGCCACCCCCACTGTTTGATGGAACAACAAGGCTGTATATATCTTACACTTGCCCATATGCGCAGCGTGTGTGGATTACCCGAAATTGTAAGGGATTGCAGGAGAAGATCAAATTGGTTCCTATTGATTTGCAAAATAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCAGCAAACAAGGTGCCATCTCTGGAACACAATAATGAAGTGAAAGGAGAGAGTCTGGATTTGATCAAATACATTGACAGTAACTTTGAAGGGCCTTCACTGTTCCCTGATGATCCTGCCAAGAGGGAGTTTGCAGAAGAGTTGCTGGCCTACACTGACTCATTCAGTAAAGCTGTGATGACTTTATTGAAGGGTGATGGAGTAGATGAAGCTGGTGCTGCCTTTGATTACATTGAGATGGCTCTCTCCAAATTCGAGGATGGACCTTTTTTCCTTGGCCAGTTCAGTCTGGTAGATATAGCATATGCTCCATTTGTTGAGAGATTTGTGCCGTTCTTACGGGAGGTGAAGAAGTATGATGCGATGGCAGGCAGGCCAAAACTGGAAGCATGGTTTGAGGAGTTGAGCAAGAACGAAGGATTCCAGCAAACTCGGCGTGAGCCAAAGGAGCTTGTTGAAGCCTACAAGAAACGCTTTGCGGCTCACCTCTGA 912 0.4474 MEALNLSYCSCVGSSRLTSSRDLLNSFCLSTKKKITIKFSNTGAFSLKNQAFISLRRPRSRTISAAMATGSVREVLPPALDSTSEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQEKIKLVPIDLQNRPAWYKEKVYPANKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAKREFAEELLAYTDSFSKAVMTLLKGDGVDEAGAAFDYIEMALSKFEDGPFFLGQFSLVDIAYAPFVERFVPFLREVKKYDAMAGRPKLEAWFEELSKNEGFQQTRREPKELVEAYKKRFAAHL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0229 303 Gene3D - 171 303 - -
Vvi13g0229 303 Gene3D Glutaredoxin 67 170 - -
Vvi13g0229 303 PANTHER GLUTATHIONE S-TRANSFERASE L1 71 300 IPR044629 GO:0004364
Vvi13g0229 303 SFLD Glutathione Transferase (cytosolic) 95 277 IPR040079 -
Vvi13g0229 303 SUPERFAMILY GST C-terminal domain-like 169 300 IPR036282 -
Vvi13g0229 303 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 92 173 IPR004045 -
Vvi13g0229 303 SUPERFAMILY Thioredoxin-like 86 174 IPR036249 -
Vvi13g0229 303 Pfam Glutathione S-transferase, N-terminal domain 96 172 IPR004045 -
Vvi13g0229 303 Pfam Glutathione S-transferase, C-terminal domain 208 273 - -
Vvi13g0229 303 SFLD Main (cytGST) 95 277 - -
Vvi13g0229 303 FunFam Lambda class glutathione S-transferase 171 302 - -
Vvi13g0229 303 CDD GST_C_Lambda 178 296 - -
Vvi13g0229 303 FunFam Glutathione S-transferase L2, chloroplastic 67 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0229 Vvi-Chr13 1939415 1954273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0229 77 299 Glutathione S-transferase Gene Family AT5G02790 67.265 4.89e-111 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0229 K00799 - vvi:100267329 609.757