Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0221 ATGTGCCGTGGCGGTAGGATGTTCGCCCCCACCAAGATCTGGCGCTGTTGGCACCGCAAGATCAACGTCAACTAG 75 0.5867 MCRGGRMFAPTKIWRCWHRKINVN* 25
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0221 24 SUPERFAMILY Ribosomal protein L4 1 23 IPR023574 GO:0003735|GO:0005840|GO:0006412
Vvi13g0221 24 Gene3D - 1 24 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0221 Vvi-Chr13 1837388 1837462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0221 1 24 Cytoplasmic Ribosomal Protein Gene Family AT5G02870 87.500 1.15e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0221 K02930 - vvi:100267208 60.8474