Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0216 ATGGCGGATGGAAGTCAAGCCATCTTCTCTGCTCTTGATAATGCCAAGACTCAACTCTACCATTTCAAGGCCATTGTCATAGCAGGGATGGGGTTCTTCACTGATGCTTATGATCTCTTTTGCATCACTGCTGTCACAAAGCTAATAGGCCGCCTGTATTACTATGATCCCATCAAGAATGAGCCAGGGAAATTGCCTACTAATGTGAGTAATGCCATTACTGGTGTGGCCTTATGTGGAACACTGGCTGGGCAACTCTTCTTTGGCTGGCTAGGTGACAAGCTTGGGAGGAAGCATGTCTATGGGATCACTCTTGTCACCATGGTGGGATGTGCTGTGGCATCAGGCCTTTCCTTTGGCTCCACAGCTCATAGCGTCATCGCTTCACTCTGCTTCTTCCGGTTCTGGCTGGGGTTTGGCATTGGAGGGGACTACCCCCTCTCTGCCGTCATCATGTCTGAGTATGCTAATCAAAAAACCCGAGGCGCTTTTATTGCTGCAGTGTTTGCAATGCAGGGGATAGGCATTTTGGTTGCAGGGGCTGTGTCCATGATTGTTTCCAAGGCCTTCTTGGTTGCTTACAAAGCTGAAGTGTTTTCCCAGAACCATGTCTTGTCTACTCAGCCACAAGGGGACTTTGTTTGGCGGATTGTCCTCATGTTTGGTGCTGTCCCTGCTATGCTGACCTACTACTGGCGGATGAAAATGCCGGAAACCGCCAGGTTCACAGCCTTGGTTAAGGGAAACCATGAGAAGGCAGCTGTAGATATGGCAAAAGTACTTGAACAGGACATAGTTGTAGAAGAATCAAAACCGAAAATTCCAGTAACTCCCAGCCCTTCATACGGGTTGTTGTCCAGGGAGTTTGTTAAGAGGCATGGTCTTCAGCTTCTAGGGACTACCAGCACCTGGTTCTTGTTGGATATCGCCTTCTACAGCCTTCAACTCACACAGAAAGACATCTACCCTGCAATAGGACTAGTACCAAAGGCCTCGACAATGAATGCAATAGAGGAGGTGTACAAAATCTCCAAGGCAATGTTCCTGGTTGCCCTCTTTGCAACTGTACCTGGGTACTGGTTCACTGTTTTCCTCATAGATAGGATTGGAAGATTCATAATCCAGCTAGGTGGGTTCCTCCTGATGTCCATTTTCATGGCGGTGATTGGATTTCTCTATGATGATCTCAGAGGAGATAAGAAAAAGTGCCCCAAGGAGTCAACCAATGAATTCTGTGAGGGTAAACCATACTTGTTTGCAGTTTTATATGGGCTCACCTTGTTCTTTGCCAACTTTGGACCAAACAGCACAACCTTCATTGTGCCAGCAGAGCTTTTCCCGGCCAGGTTCAGGTCGACGTGCCATGGTATCTCAGCTGCAGCAGGGAAAGCAGGGGCCATTATAGGGGCATTTCTGGTGCAGAGTTATACTCAGAATGTGGGTGATATCAAGAGGGCAATTGTGGCTTTGTCTATGGTGAATTTGATTGGGTTCTTCTTGTCTTTCTTGATTCCAGAAACAAAAGGCAAGTCACTAGAACAACTCTCTGGGGAGGACCAGAATGGAGGTGATGGTGAAGGAGGAGTCAAAACAGATGAAAAAGTTTAG 1608 0.4733 MADGSQAIFSALDNAKTQLYHFKAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYYDPIKNEPGKLPTNVSNAITGVALCGTLAGQLFFGWLGDKLGRKHVYGITLVTMVGCAVASGLSFGSTAHSVIASLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGAFIAAVFAMQGIGILVAGAVSMIVSKAFLVAYKAEVFSQNHVLSTQPQGDFVWRIVLMFGAVPAMLTYYWRMKMPETARFTALVKGNHEKAAVDMAKVLEQDIVVEESKPKIPVTPSPSYGLLSREFVKRHGLQLLGTTSTWFLLDIAFYSLQLTQKDIYPAIGLVPKASTMNAIEEVYKISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIFMAVIGFLYDDLRGDKKKCPKESTNEFCEGKPYLFAVLYGLTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFLVQSYTQNVGDIKRAIVALSMVNLIGFFLSFLIPETKGKSLEQLSGEDQNGGDGEGGVKTDEKV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0216 535 MobiDBLite consensus disorder prediction 513 535 - -
Vvi13g0216 535 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Vvi13g0216 535 Pfam Sugar (and other) transporter 25 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi13g0216 535 NCBIfam phosphate:H+ symporter 11 518 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vvi13g0216 535 Gene3D MFS general substrate transporter like domains 20 531 IPR036259 -
Vvi13g0216 535 CDD MFS_PhT 25 508 - -
Vvi13g0216 535 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 512 - -
Vvi13g0216 535 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857
Vvi13g0216 535 FunFam Inorganic phosphate transporter 1-6 20 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0216 Vvi-Chr13 1809332 1810939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0216 1 520 Inorganic Solute Cotransporters AT5G43360 61.278 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0216 K08176 - vvi:100255410 1050.81