Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0182 ATGGAAGTATTACTCTCTAGCCTTGAAGAGTCATCTTTTGAATGGAAACTGCCATTAATAAGCACCATTCTGGTAACCCTAATAGCCCTTCTTGCTGGGTCCATCAAATTAAAGTTTTCTCCACCTGTAGACAAGAAGCTTCCATCCGGGTCCTTAGGGTTTCCATTCATAGGAGAAACCATAAGCTTTCTTAGGGCGCAGAGGCAGGACAAGACTGTAGAATGGATCGAAAGCCGTATCGCCAAGTATGGACCAGTGTTCAAGACCTCACTGATGGGCTCAAAGGTAGTGGTTTTAACTGGCCAAGCTGGTAATCGCTTTCTCTTCAGTGGAAGTGACAATGGCATTCTGAGCAACCAGCCGATGTCCGTAGCAAAGATTCTTGGAAAGCACAGCATCTTTGAGCTTGCAGGGACAAGGCACAAGCTTGTGAGAGGTGCAATCATGAATTTTTTGAAACCAGAAAGCATTCAAAGGTCAGTGAGCAGGATGGATTCTGTAGTCCAGCAACAACTATTTCAGGAGCTGGAAGGGAAGGATTCAGTACAGATGGTTGGGTTGATGAAGAAGATAACGTTCAAGGTGACTTGCAGCCTACTTTTTGGATTACCAGATGGGAAAGAGACAGAAGAACTTTTGGAGGATTTTACCACTGCCCTCAAAGGAGCTTGGACAGTTCCTTGGGATCTACCGGGGACGGTCTTTCGCAAAGCCTTGCAAGCAAGAGGGAGGATATGTAAGCAGCTAGCTGAACTTGTACGAGAGAGGAAGGCAAAAATTGAAGAAGGAAGAGTGGACTCCCATGAAGATATCATCTCTAGCCTTATCACTCTGAGACAAGAAAATGGCCAGCCTTTATCGGAAGAGGAGATCATTGACAACTTGATCTCGGTGGTTATTGCAAGCCATGATACGTCTACAGTACTCCTGGGACTCCTCATAAGGCACCTTGCAAGGGACACTGAGGTTTGCAAGAAGGTGCTTGAAGAGCAAAAACAAGTTGCAAAGGCCAAAGAAGGAAAAGGCAATGGAAAGCTTACATGGGGTGAAGTACAAATGATGAAATATACATGGAGAGTGGCTCAAGAGCTCATGAGGATGACTCCTCCAGTTCTTGGAAACTTCAAATGTGCTTGGAGAGACACCACTTTTGGTGGCTTTGATATCCCCAAAGGATGGCAAGTATTTTGGGTGGCTCCTGGCACACACATGGACAAGAAAGTTTTTGAAGAGCCAGAGAAGTTTGATCCATCAAGATTTGAGAACCCTTCAACATCAGTCCCCCCATACGCATACTTAGCTTTTGGAGCAGGCCCACGAGCTTGCCCTGGTGCAGATTTTTCTCGGGTTGAAGTGCTGCTCATGATCCATAATTTGATAACAAAATATCACTGGGCAGAAATGATCATTGATGAACCTATTGTACGTGAGCCCATGCCCTACCCAGCCATGGGCCTTCCTGTCAAGCTTTACCAAAGAAGTACTACATAA 1491 0.4547 MEVLLSSLEESSFEWKLPLISTILVTLIALLAGSIKLKFSPPVDKKLPSGSLGFPFIGETISFLRAQRQDKTVEWIESRIAKYGPVFKTSLMGSKVVVLTGQAGNRFLFSGSDNGILSNQPMSVAKILGKHSIFELAGTRHKLVRGAIMNFLKPESIQRSVSRMDSVVQQQLFQELEGKDSVQMVGLMKKITFKVTCSLLFGLPDGKETEELLEDFTTALKGAWTVPWDLPGTVFRKALQARGRICKQLAELVRERKAKIEEGRVDSHEDIISSLITLRQENGQPLSEEEIIDNLISVVIASHDTSTVLLGLLIRHLARDTEVCKKVLEEQKQVAKAKEGKGNGKLTWGEVQMMKYTWRVAQELMRMTPPVLGNFKCAWRDTTFGGFDIPKGWQVFWVAPGTHMDKKVFEEPEKFDPSRFENPSTSVPPYAYLAFGAGPRACPGADFSRVEVLLMIHNLITKYHWAEMIIDEPIVREPMPYPAMGLPVKLYQRSTT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0182 496 FunFam Taxadiene 5-alpha hydroxylase 38 493 - -
Vvi13g0182 496 Gene3D Cytochrome P450 41 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 SUPERFAMILY Cytochrome P450 44 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vvi13g0182 496 PANTHER CYTOCHROME P450 26 46 482 - -
Vvi13g0182 496 Pfam Cytochrome P450 48 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0182 496 CDD CYP90-like 79 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0182 Vvi-Chr13 1550154 1552089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0182 40 493 Cytochrome P450 AT1G12740 30.152 6.73e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0182 - - vvi:100248408 986.482