Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0181 ATGTCTTCTTCATTTCCAAATCCATTCCTCTTCCTGCTCTCTCATAATTCTGAAACCTTGGAGCTTGCTCCACTGCATCTTCATTTACCATTCATCCTCTTGCTCCTTTTCCTTTTCGTTTTCGCTTTTCTCATCCTCTACAGACCCATACCCAAAACCCTAATCACCAAGCAAATGCCACTGCTCCCTCCTGGTCCAACTCCATGGCCATTAGTTGGGAACCTGCCTGAATTATTAACAAAAAAGCCGGTATTCCGGTGGATACTTGGACTTTTGGAGGAACTCAACACTGAGATTGCATGCATCAAACTGGGCAATGTCCATGTCATTCCCGTGATTTCGCCTGAGATTGCCAGGGAGTTTTTGAAGAAACATGATGCAGTGTTTGCATCCAGACCTATTACAATGGCGTCCCATCACTTGAGCAGAGGGTTCCTGACAACAGCTCTTTCTCCATGGGGAGAGCACCATAATATTACGGACTCATCGGTTGTGAATGTGAGAAATGCAGTCAGACAATACACAGGAAATGTGGTTAGGAAGATGATGTTCAGCAGAAGGTACTTTGGGGAAGGAAGGAAAGATGGAGGGCCTGGACTTGAAGAAGAAGAACACGTCAACTCCCTCTTTACTTTGCTTGCTTACCTATATTCATTCTCTCCATCTGATTACCTTCCATGCCTGAGAGTCTTCGACTTAGATGGCCATGAGACGATGGTAAAAGACGCTTTGAGCATCATCAACAAGCATCATGATCCGATAGTGGATGAGAGAATAATACAATGGAGGAATGGGGAGAAGAAGGAGGTTGAGGACATACTCGATGTTTTCCTTACAATCAGCGACACAAAGGGAAAACCATTGCTATCAGTAGAAGAGATCAAAGCCCAACTCATAGAACTGATGATTGAAATAGTGGACAATCCAGCGCATGCAGCTGAGTGGGCAATGGCAGAAATGATCAATCAACCCGAGATTATGCAGAAGGCCGTAGAAGAAATCGATAGAGTGGTTGGAAAGGATAGACTTGTTCAAGAATCCGATATCGCGCAGCTCAAATATGTTAAAGCCTGTGCTAGGGAAGCTCTGCGGCTTCACCCCATGGCACCATTCAACGTGCCCCATGTGTCCATGGCGGACGCCGTTGTGGCCGGTTACTTCATCCCCAAAGGCAGCCATGTCCTGCTGAGCCGGGTAGGGCTTGGACGGAACCCTAGAGTGTGGGAAGAGCCATTAAAGTTTAAACCAGAGCGGCACATGAATGATGAAGTGGTGGATTTAGCTGAGCATGAGCTTCGGTTCATTTCATTTAGTACTGGGAGACGCGGGTGTCCTGGAACTGCCTTAGGGACAGCCTTGACAGTTACACTCTTGGCGAGACTCCTTCAATGTTTTTCGTGGAGTGTGCCACCGAACCAGGACCAAATTGACCTCACAGAATCAATGAACGAGCTCTTTCTAGCCAAGCCTCTCCATGCTCATGCAAAACCACGCTTGCCTGCTTCCATGTATGGGAATTGA 1521 0.4688 MSSSFPNPFLFLLSHNSETLELAPLHLHLPFILLLLFLFVFAFLILYRPIPKTLITKQMPLLPPGPTPWPLVGNLPELLTKKPVFRWILGLLEELNTEIACIKLGNVHVIPVISPEIAREFLKKHDAVFASRPITMASHHLSRGFLTTALSPWGEHHNITDSSVVNVRNAVRQYTGNVVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTLLAYLYSFSPSDYLPCLRVFDLDGHETMVKDALSIINKHHDPIVDERIIQWRNGEKKEVEDILDVFLTISDTKGKPLLSVEEIKAQLIELMIEIVDNPAHAAEWAMAEMINQPEIMQKAVEEIDRVVGKDRLVQESDIAQLKYVKACAREALRLHPMAPFNVPHVSMADAVVAGYFIPKGSHVLLSRVGLGRNPRVWEEPLKFKPERHMNDEVVDLAEHELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQIDLTESMNELFLAKPLHAHAKPRLPASMYGN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0181 506 SUPERFAMILY Cytochrome P450 63 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS P450 superfamily signature 322 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vvi13g0181 506 PRINTS E-class P450 group I signature 117 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 Gene3D Cytochrome P450 56 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 PANTHER CYTOCHROME P450 98A9 38 157 - -
Vvi13g0181 506 FunFam Cytochrome P450 9 156 502 - -
Vvi13g0181 506 Pfam Cytochrome P450 161 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0181 506 Pfam Cytochrome P450 63 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0181 Vvi-Chr13 1541967 1543728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0181 30 504 Cytochrome P450 AT5G05260 54.685 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0181 K12153 - vvi:100253513 934.48