Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0180 ATGCAGAAGGTCATGGAAGAAATCGATAGAGTGGTTGGAAAGGAGAGACTTGTTAAAGAATTCGATATTATGCAGCTCAAATATGTTAAGGCATGTGGAAGGGAAGCTATGCGTCTTCACCCCATGTCATCATTCAATGACCCCCATCTGTCCATGGTGGATGCTATTGTAGCCGGCTACTTCATCCCTAAAGGCAGTCATGTCCTACTGAACCAGGTAGGGCTTGGGCGAAACCCTAAAGTTTGGGAAGAGCCATTAAGGTTCAAACCAGAGCGGCATATGAATGATGATGTGTTGGATTTAGCTGAGCCTGAGGTTCGATTCATTTCATTTAGTGCTAAGAGACAATGGTGCTTTGGAACTGCCCTAGGGACAACATTGACAGTTACACTCTTGGCAAGGCTTCTTCAAGGTTTTTCATGGAGTGCGCCACACAACCACGAGCAAATTGACCTCAAAGAATCCACACAACCACTAATTTGA 483 0.4493 MQKVMEEIDRVVGKERLVKEFDIMQLKYVKACGREAMRLHPMSSFNDPHLSMVDAIVAGYFIPKGSHVLLNQVGLGRNPKVWEEPLRFKPERHMNDDVLDLAEPEVRFISFSAKRQWCFGTALGTTLTVTLLARLLQGFSWSAPHNHEQIDLKESTQPLI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0180 160 FunFam Tryptophan N-monooxygenase 2 1 160 - -
Vvi13g0180 160 Pfam Cytochrome P450 1 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0180 160 PANTHER CYTOCHROME P450 98A9 1 156 - -
Vvi13g0180 160 SUPERFAMILY Cytochrome P450 1 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0180 160 Gene3D Cytochrome P450 1 159 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0180 160 PRINTS E-class P450 group I signature 118 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0180 160 PRINTS E-class P450 group I signature 108 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0180 160 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0180 160 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0180 Vvi-Chr13 1533296 1533778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0180 1 157 Cytochrome P450 AT4G39950 59.494 2.96e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0180 - K12153 vvi:100258660 311.612