Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0179 ATGCCACTGCTCCCTCCTGGCCCAACTCCATGGCCATTACCAGCAAGACATATCCATAATTTTACGGAATCATCGGTTGTGAATGTGAGAAATACAGTCAGACAATACACAGGAAATGTGGTTAGGAAGATGATGTTCAGCAGAAGGTACTTTGGGGAAGGAAGGAAAGATGGAGGGCCTGGACTTGAAGAAGAAGAACACGTAAACTCCCTCTTTACCACGCTTGCTTACCTATATGTATTCTCTCCATCTGATTACCTTCCATGCCTGAGAGTCTTCGACCTAGATGGCCATGAGAAGATGGTAAAAGAGGCTTTGAGAATCATCAACAAGCATCATGATCCGATTGTGGATGAAAGAATAATACAATGGAGAAATGGGGAGAAGAAGGAGGTTGAGGACATACTCGATGTTTTCATTACAATCAGCGACACAAAGGGAAAACCATTGCTATCAGTAGAAGAGATCAAAGCCCAACTCATAGAACTGATGATTGAAATAGTGGATAATCCAGCGCATGCAGCTGAGTGGGCAATGGCAGAAATGATCAATCAACCCGAGATTATGCAGAAGGCCGTAGAAGAAATCGATAGAGTGGTTGGAAAGGATAGACTTGTTCAAGAATCCGATATCGCGCAGCTCAAATATGTTAAAGCCTGTGCTAGGGAAGCTCTGCGGCTTCACCCCATAGCACCATTCAACGTGCCCCATGTGTCCATGGCGGACGCTGTTGTGGCCGGCTACTTCATCCCCAAAGGCAGCCATGTCCTGCTGAGCCGGGTAGGGCTTGGACGGAACCCTAGAGTGTGGGAAGAGCCATTAAAGTTTAAACCAGAGCGGCATATGAATGATGAAGTGGTGGATTTAGCTGAGCCTGAGCTTCGGTTCATTTCATTTAGTACTGGGAGACGCGGGTGTCCTGGAACTGCCTTAGGGACAGCCTTGACAGTTACACTCTTGGCGAGACTCCTTCAATGTTTTTCGTGGAGTGTGCCACCGAACCAGGACCAAATTGACCTCACAGAATCAATGAACGACCTCTTTCTAGCCAAGCCTCTCCATGCTCATGCAAAACCACGCTTGCATGCTTCCATGTATGGGAATTGA 1107 0.4697 MPLLPPGPTPWPLPARHIHNFTESSVVNVRNTVRQYTGNVVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTTLAYLYVFSPSDYLPCLRVFDLDGHEKMVKEALRIINKHHDPIVDERIIQWRNGEKKEVEDILDVFITISDTKGKPLLSVEEIKAQLIELMIEIVDNPAHAAEWAMAEMINQPEIMQKAVEEIDRVVGKDRLVQESDIAQLKYVKACAREALRLHPIAPFNVPHVSMADAVVAGYFIPKGSHVLLSRVGLGRNPRVWEEPLKFKPERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQIDLTESMNDLFLAKPLHAHAKPRLHASMYGN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0179 368 PANTHER CYTOCHROME P450 98A9 23 366 - -
Vvi13g0179 368 Pfam Cytochrome P450 23 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 SUPERFAMILY Cytochrome P450 18 360 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 299 308 IPR017972 GO:0005506|GO:0016705
Vvi13g0179 368 Gene3D Cytochrome P450 13 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS P450 superfamily signature 184 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS P450 superfamily signature 297 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS P450 superfamily signature 219 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS E-class P450 group I signature 175 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS E-class P450 group I signature 259 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS E-class P450 group I signature 306 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS E-class P450 group I signature 296 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0179 368 PRINTS E-class P450 group I signature 36 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0179 Vvi-Chr13 1527055 1528642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0179 26 366 Cytochrome P450 AT5G05260 63.557 4.35e-161 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0179 K12153 - vvi:100263812 691.034