Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0175 ATGGGAGGTTTCTCATGCATCCTAGTACCGAAGATCAGCAAGAGACGAATGATGATGGGTAGCAGCTGCAACTCAACCATGTCTTCTTCATTTCCAAATCCATTCCTCTTCCTGCATTCTGATCATTCCGAAACCTTGGAGCTTGCTTCACTTCATCTTCATTTACCATTCATCCTCTTGCTCCTTGTCCTTTTCGTTGTCGCTTTTCTCATCCTCTACAAACTCAAACCCAAAACCCTAATCACCAAGCAAATGCCACTGCTCCCTCCTGGTCCAACTCCATGGCCATTAGTTGGGAACCTGCCTGAATTATTCACAAAAAAGCCGGTATTCCGGTGGATACTTGGACTTTTGGAGGAACTCAACACTGAGATTGCATGCATCAAACTGGGCAATGTCCATGTCATTCCCGTGATTTCGCCTGAGATTGCCAGGGAGTTTTTGAAGAAACATGATGCAGTGTTTGCATCCAGACCTATTACAATGGCGTCCCATCACTTGAGCAGAGGGTTCCTGACAACAGCTCTTTCTCCATGGGGAGAGCAGTGGAAGAAGATGAGAAGGATCATCATTTCTGAGGTGCTTAAGCCAGAAAGACATATTTCGCTCCTCCAGAAGAGAACTGAAGAAGCCGACAATCTTGTCCGATTCATTTATAACCAGTGTAAGTTCTCTAGTATTACTAGCCATAATTTTACGGACTCATCGGTTGTGAATGTGAGAAATGCAGTCAGACAATACACAGGAAATGTGGTTAGGAAGATGATGTTCAGCAGAAGGTACTTTGGGGAAGTAAGGAAAGATGGAGGGCCTGGACTTGAAGAAGAAGAACACGTCAACTCCCTCTTTACTTCGCTTGCTTACCTATATTCATTCTCTCCATCTGATTACCTTCCATGCCTGAGAGTCTTCGACTTAGATGGCCATGAGACGATGGTAAAAGACGCTTTGAGCATCATCAACAAGCATCATGATCCGATATTGGATGAGAGAATAATGAAATGGAGGAATGGGGAGAAGAAGGAGGTTGAGGACACACTCGATGTTTTCCTTACAATCAGGGACACAAAGGGAAAACCATTGCTATCAGTAGAAGAGATCAAAGCCCAACTCATAGAACTGATGATTGAAATAGTGGACAATCCAGCGCATGCAGCTGAGTGGGCAATGGCAGAAATGATCGATCAACCCGAGATTATGCAGAAGGCCGTAGAAGAAATCGATAGAGTGGTTGGAAAGGATAGACTTGTTCAAGAATCCGATATCGCGCAGCTCAAATATGTTAAAGCCTGTGCTAGGGAAGCTCTGCGACTTCACCCCATAGCACCATTCAACGTGCCCCATGTGTCCATGGCGGACGCTGTTGTGGCCGGCTACTTCATCCCCAAAGGCAGCCATGTCCTGCTGAGCCGGGTAGGGCTTGGACGGAACCCTAGAGTGTGGGAAGAGCCATTAAAGTTTAAACCAGAGCGGCATATGAATGATGAAGTGGTGGATTTAGCTGAGCCTGAGCTTCGGTTCATTTCATTTAGTACTGGGAGACGCGGGTGTCCTGGAACTGCCTTAGGGACAGCCTTGACAGTTACACTCTTGGCGAGACTCCTTCAATGTTTTTCGTGGAGTGTGCCACCGAACCAGGACCAAATTGACCTCACAGAATCAATGAACGAGCTCTTTCTAGCCAAGCCTCTCCATGCTCATGCAAAACCACGCTTGCCTGCTTCCATGTATGGGAATTGA 1740 0.4638 MGGFSCILVPKISKRRMMMGSSCNSTMSSSFPNPFLFLHSDHSETLELASLHLHLPFILLLLVLFVVAFLILYKLKPKTLITKQMPLLPPGPTPWPLVGNLPELFTKKPVFRWILGLLEELNTEIACIKLGNVHVIPVISPEIAREFLKKHDAVFASRPITMASHHLSRGFLTTALSPWGEQWKKMRRIIISEVLKPERHISLLQKRTEEADNLVRFIYNQCKFSSITSHNFTDSSVVNVRNAVRQYTGNVVRKMMFSRRYFGEVRKDGGPGLEEEEHVNSLFTSLAYLYSFSPSDYLPCLRVFDLDGHETMVKDALSIINKHHDPILDERIMKWRNGEKKEVEDTLDVFLTIRDTKGKPLLSVEEIKAQLIELMIEIVDNPAHAAEWAMAEMIDQPEIMQKAVEEIDRVVGKDRLVQESDIAQLKYVKACAREALRLHPIAPFNVPHVSMADAVVAGYFIPKGSHVLLSRVGLGRNPRVWEEPLKFKPERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQIDLTESMNELFLAKPLHAHAKPRLPASMYGN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0175 579 SUPERFAMILY Cytochrome P450 89 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 510 519 IPR017972 GO:0005506|GO:0016705
Vvi13g0175 579 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS P450 superfamily signature 508 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS P450 superfamily signature 395 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 Gene3D Cytochrome P450 82 575 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 FunFam Cytochrome P450 9 81 575 - -
Vvi13g0175 579 PRINTS E-class P450 group I signature 247 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS E-class P450 group I signature 429 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS E-class P450 group I signature 143 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS E-class P450 group I signature 386 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS E-class P450 group I signature 507 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS E-class P450 group I signature 517 540 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PRINTS E-class P450 group I signature 470 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0175 579 PANTHER CYTOCHROME P450 98A9 61 577 - -
Vvi13g0175 579 Pfam Cytochrome P450 89 563 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0175 Vvi-Chr13 1467798 1469637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0175 56 577 Cytochrome P450 AT5G05260 57.955 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0175 K12153 - vvi:100255415 1066.6