Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0166 ATGGATCCTGACCATGGGAGGTGTTGGGGCACTTCAAAGAAGGACTCTTGGAAGACACTTCTGCTCTTATCTTACCAAAGTCTTGGGGTAGTTTATGGGGACCTTGGCATTTCCCCTCTCTATGTTTACAAGAGCACATTTGCAGAAGATATTCATCATTCAGAAACAAATGAAGAGATTTTTGGAGTTCTTTCCTTTGTCTTCTGGACTCTTACTCTAGTCCCTCTATTCAAGTATGTCTTTATAGTCCTTCGAGCTGATGACAATGGAGAGGGTGGTACTTTTGCTCTGTATTCCTTGATATGCAGGCATGCAAAAGTAAGCCTTCTTCCCAATAGGCAGGTTGCTGATGAAGCACTTTCCACATATAAACTGGAGCATCCTCCAGAGCAAAAGAACAGCTCAAGGGTTAAGATGCTGCTTGAGAAGCACAGAGTGTTGCACACGGCTTTGCTAATTTTGGTTCTTCTTGGCACTTGTATGGTAATTGGAGATGGACTGCTTACTCCAGCCATTTCTGTTTTCTCTGCTGTGTCCGGTCTCGAGTTATCCATGTCCAAAGAACACCATCAGTATGCAGTGATTCCTATTACTTGCTTCATATTAGTGTGTCTATTTGCACTACAACACTATGGCACACATCGGGTTGGATTCTTCTTTGCTCCAGTTGTGTTGATTTGGCTACTATGCATCAGTGCTCTTGGCTTATACAATATATTCCGCTGGAACCCACATGTCTATCAAGCTCTGTCCCCATATTACATGTTCAAATTCTTGAAGAAGACGAGGAAAGATGGATGGATGTCTTTGGGTGGAATTTTATTGTGCATAACAGGCTCAGAGGCAATGTTTGCTGATCTTGGACACTTCTCATACACTGCAATTCAGATTGCCTTCACTTTCTTGGTTTATCCTGCTCTGATATTGGCATATATGGGTCAAGCTGCTTACTTGTCGATACATCATGACAACAGTTACCAGATCAGTTTTTATGTTTCAGTTCCAGAAGCTGTGAGGTGGCCAGTGCTTATAATAGCGATTCTTGCCTCTGTTGTGGGAAGTCAAGCGATCATCAGCGGAACATTCTCTATAATCAACCAGAGCCAGTCACTTGGATGCTTCCCAAGAGTCAAGGTTGTTCATACCTCTGATAAAATACATGGCCAGATCTACATCCCAGAGATCAACTGGATACTTATGATTCTCTGCATTGCTGTGACCATTGGATTCAGAGATACAAAACATATGGGGAATGCATCAGGGTTGGCAGTGATGGCAGTAATGCTAGTGACCACATGCCTCACTTCCTTGGTTATTATCCTCTGTTGGCACAAACCCCCTATTGTAGCTCTCTCTTTCCTACTGTTCTTTGGCTCTATAGAATTACTCTACTTCTCAGCCTCCCTCACAAAGTTCCGTGAGGGTGCCTGGCTCCCCATCCTGCTAGCTCTCTTCCTCATGACCATCATGTATGTTTGGCATTATGCCACCATCAAGAAATATGAATTTGACCTTCACAACAAGGTTTCTTTAGAATGGCTTTTAGCCTTGGGTCCAAGCTTGGGAATAGCTCGAGTACCTGGTATTGGGCTGGTGTTCACTGATCTCACCTCTGGCATCCCGGCAAACTTCTCCCGCTTTGTCACCAACCTCCCCGCCTTTCACCGTGTCCTTGTCTTTGTATGTGTGAAATCAGTGCCAGTCCCTTATGTGCCCCCAGCTGAGAGGTATCTTGTGGGCCGGGTGGGTCCTGCTACTCACCGCTCCTACAGATGCATTGTCCGTTATGGCTATCGTGATGTTCACCAGGATGTTGATTCTTTTGAATCTGAACTTGTTGGTAGGCTGGCTGATTTCATCCGCTATGATTGGGTTCGGACACATGGCACGGACCCATGTATTGAAGATGATGGATCCCAATCTGGGGGATCCTCAAGTGAATGTAGATTGACAGTGATTGGAAATGTAGCATTTTCTGGTACACCAGCTTATGAGATTGAGGAGAGCTTGCAGCCAGCTAGTGTATCCATTGGTTTCCCAACTGTGGAAAGCGTCACAGATGTTATTGAGATGGAACCCATTTCTGTTACCAAAAGAAGAGTGAGGTTTGCCATTGATGATGAGTCTGAAACTGATACACGGTCTGAGACTGATGTGCAGTTGCAAGAAGAGTTGGAAGAGTTATGGGCAGCTCAACAATCGGGGACTGCATTCATACTTGGGCACTCACATGTTCGAGCAAAACAAGGATCTTCCCTTGTGAGGAGATTGGCAATCAATGTCGGGTATAATTTCCTGAGGAGGAATTGCCGAGGACCAGATGTAGCTCTCAAGGTGCCACCAGTGTCTCTCCTTGAGGTTGGCATGGTTTATATCGTCTGA 2382 0.4505 MDPDHGRCWGTSKKDSWKTLLLLSYQSLGVVYGDLGISPLYVYKSTFAEDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYKLEHPPEQKNSSRVKMLLEKHRVLHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKEHHQYAVIPITCFILVCLFALQHYGTHRVGFFFAPVVLIWLLCISALGLYNIFRWNPHVYQALSPYYMFKFLKKTRKDGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSIHHDNSYQISFYVSVPEAVRWPVLIIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPPIVALSFLLFFGSIELLYFSASLTKFREGAWLPILLALFLMTIMYVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRVLVFVCVKSVPVPYVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVGRLADFIRYDWVRTHGTDPCIEDDGSQSGGSSSECRLTVIGNVAFSGTPAYEIEESLQPASVSIGFPTVESVTDVIEMEPISVTKRRVRFAIDDESETDTRSETDVQLQEELEELWAAQQSGTAFILGHSHVRAKQGSSLVRRLAINVGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0166 793 Pfam K+ potassium transporter 25 600 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi13g0166 793 NCBIfam potassium uptake protein 23 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi13g0166 793 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0166 Vvi-Chr13 1390601 1397383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0166 1 793 Inorganic Solute Cotransporters AT2G40540 80.870 0.0 1314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0166 K03549 - vvi:100232992 1545.02