Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0144 ATGAAGCCGGCCAAGACTAATGCCGGAGCTCTGGCGCCGCTCCTCCCGGAGCTGAGCTCGCAGGAGGCTAAGGCACCGAGGAGAGCTTCGGTGTTAGGTGCGGTGTTCAACGTCTCAACAAGCATCATCGGCGCCGGAATCATGTCCATTCCGGCTACTCTCAAGGTCCTCGGGGTAGCTCCGGCGCTAGGGCTGATCGTGATCATCGCTCTCCTGGTGGATGTCTCCGTCGAGTTCCTGCTGAGATTCACGCATTCTGGCCGGTCGACGACCTATGCTGGCCTGATGGCGGAGTCGTACGGACGGATTGGATCTGTCGCTGTTCAGATTTGCGTGATGATCACCAACCTCGGTTGTCTGATTATTTATCAGATTATTATCGGGGACGTACTTTCAGGAAATCAGCCTGAAGGAACAGGGCACTTAGGCGTTCTACAAGAATGGTTTGGCCTTCACTGGTGGAATTCACGTGCCTTCGCGCTTCTCATCGTTGTCTTATTCGTTCTGTTTCCATTAGCCTTGTTTCGGCGTGTGGGATCCTTGAGATTCACTTCGGCAATATCAGTGCTCCTAGCAGTGGTGTTTGTTGCCATAAGCTCGGTGATGGCGATCTCTGCACTTTTTGAAGGGAAAGCACAGAGCCCCAGATTGCTACCCGAGTTGGACACCCAAACCTCCTTCTTTGACCTTTTCACTGCTGTTCCAGTCATCGTCACGGCCTTTACATTTCATTTCAATGTTCACCCGATTGGATCCGAGCTTGGAAAACCTTCTGATATGATTTCAGCTGTCCGGGTGTCACTGGTACTCTGCGCTGTCATTTACTCCTCTATAGGAATCTTTGGGTACCTCCTTTTTGGGGATTCAATCATGCCCGACATACTTGTAAATTTCGACCAAAATTCTGGTTCAGCAATGGGGGCCTTACTCAACGACACAGTCCGATTAAGCTATGCACTTCACCTCATGCTGGTGTTCCCTCTCTTGAACTTCTCCTTGAGGGCCAACGTAGATGAGCTCCTTTTCCCTAAGAGGCCCCTTTTGGCAACAGCCACCCCCAGATTCATGTCCATCACTGTTATTTTGCTGGTCTTCTCTTATTTTGCTGCTATAGCCATCCCCAATATTTGGTATTTCTTCCAATTTATGGGATCAACTTCTGCTGTCTGCCTCGCCTTCATCTTCCCAGCTGCAATCACCCTGAGGGATGTTCATGGCATATCCACAAGAAAGGACAGGGTAATCGCAACAATAATGATAATCCTGGCTGTAGCAACAAGCTCAGTTGCTATTTCCACCAATTTATATAGTTTGTTCCTAAACAAGAAGTAG 1332 0.4947 MKPAKTNAGALAPLLPELSSQEAKAPRRASVLGAVFNVSTSIIGAGIMSIPATLKVLGVAPALGLIVIIALLVDVSVEFLLRFTHSGRSTTYAGLMAESYGRIGSVAVQICVMITNLGCLIIYQIIIGDVLSGNQPEGTGHLGVLQEWFGLHWWNSRAFALLIVVLFVLFPLALFRRVGSLRFTSAISVLLAVVFVAISSVMAISALFEGKAQSPRLLPELDTQTSFFDLFTAVPVIVTAFTFHFNVHPIGSELGKPSDMISAVRVSLVLCAVIYSSIGIFGYLLFGDSIMPDILVNFDQNSGSAMGALLNDTVRLSYALHLMLVFPLLNFSLRANVDELLFPKRPLLATATPRFMSITVILLVFSYFAAIAIPNIWYFFQFMGSTSAVCLAFIFPAAITLRDVHGISTRKDRVIATIMIILAVATSSVAISTNLYSLFLNKK* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0144 443 Pfam Transmembrane amino acid transporter protein 28 426 IPR013057 -
Vvi13g0144 443 PANTHER AMINO ACID TRANSPORTER 21 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0144 Vvi-Chr13 1250126 1253132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0144 14 441 Amino Acid or Auxin Permease AAAP Family AT3G56200 63.488 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0144 - - vvi:100255327 815.068