Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0071 ATGCCTCCAGCAAACAACAACCCAAACTCAGAGCCATTTGAGATCTTCTTCCGAGGATGGCTGGTAAGGCACGAGGAAGTCCGCCTGCTACTCCAGCAAGCAGATGAGCGCGACTGCGACGAGACAAGAGAAGACGAGGAGGCGAGGGTGCAAGAACTGATAGGAAGGGTGGTGGCGCACTACGCGGAGTACTATAAAGCCAAGCAGAGAGTGGTGCGAGAGGACGTGATGACCTTGTTCGAACCACCATGGTTGACTCCTTTCGAGCGAAGCCTACTTTGGATTGCTGGGTTCATGCCAGGGTTCGCGTTTCGGCTGGTGATGAACTATGTAAAGGACCTGAACGGGGAGCAGACGCGGATGATGGAGCAGCTGAAGACGGAGACGGCGGCGGAGGAGATAGACCTGACGGCGGAGCTAGTGAAGGTGAAGAGGAGTCCGACAATGATATCGCTGGTGGAGATGGCGGCAAGGGGGAGAGAGTGGGCGGATGGGGAAAGGGATGCGGTGAAGGAGAAAATTGATATGGTGAAGTTAGCAATGGAGATGCTGGTGGAGTGTGCTGATTGTCTGAGATACAAAACTGCTCTTAAAATCATGGAGATACTCAACCCATCTCAGAATGTGAAGTTCTTGCTGGCCATAACTGGGCTTCAGCTCCGAGTTCGCAACTGGGGCTTGCAGAGAGAAGCCGAGAGCCGCAATGACAACAGCCCCCACTAG 723 0.5408 MPPANNNPNSEPFEIFFRGWLVRHEEVRLLLQQADERDCDETREDEEARVQELIGRVVAHYAEYYKAKQRVVREDVMTLFEPPWLTPFERSLLWIAGFMPGFAFRLVMNYVKDLNGEQTRMMEQLKTETAAEEIDLTAELVKVKRSPTMISLVEMAARGREWADGERDAVKEKIDMVKLAMEMLVECADCLRYKTALKIMEILNPSQNVKFLLAITGLQLRVRNWGLQREAESRNDNSPH* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0071 240 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 11 237 - -
Vvi13g0071 240 Pfam Seed dormancy control 45 108 IPR025422 GO:0006351|GO:0043565
Vvi13g0071 240 ProSiteProfiles DOG1 domain profile. 10 232 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0071 Vvi-Chr13 650002 650724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0071 2 223 Calmodulin-binding Proteins AT1G22070 27.706 2.14e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0071 - - vvi:100257046 474.167