Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0069 ATGCCTCTAGCAAACAACAACCCAAACCCAAACCCTGGGCCATTTGAGAGGTTCTTTCGAGGATGGCTGGTCAGGCAAGAGGAACTCCGCCAGCTACTCCTCCAAGCAACTGAGCGCGACTGCGACGAGGAGGCGGGGCTGCAAGAGCTGATAGGGAGAGCGGTGGCGCACTACGCTGAGTACTACAAAGCCAAGCAAAGAGTGGTGCGAGAGGACGTGCTGATCTTGTTGGGACCACCATGGCTTACTCCCTTCGAGCGAAGCCTACTTTGGATTGGTGGGTTCAAGCCAGGGTTCGCGTTTCGGCTGGTGACGAATTATGTAACGAACCTGACAGAGGAGCAGAAGCAAAGGATGGAGCAGCTGAGGGCGGAAACGGCGGAGGATGAGAGGAAGCTGACTGCGGAGCTGTCGAGGGTGCGGACGAGGCCGACAGCTATATCGCTGGTGGAGATGGCAACAATGGCGAGAGAGCGGGTGAATGGAGAAAGAGATACGGTGGATGAGCGAATTGAGATGATGAAGTTAGCAGCGGAGATTCTGGTGGAGTGTGCTGATTATCTGAGATGCAAAACTGCTCTTAAGATCATGGGCATACTCAACCCTTCTCAGAATGTGAAGTTCTTGCTCGCCGTAACTCAGCTTCAGCGCCGAGTTCGCAACTGGCGCATGGAGAGAGAAGCTGAGAGCAGCACTGACAACAGCCGCCACTAG 714 0.549 MPLANNNPNPNPGPFERFFRGWLVRQEELRQLLLQATERDCDEEAGLQELIGRAVAHYAEYYKAKQRVVREDVLILLGPPWLTPFERSLLWIGGFKPGFAFRLVTNYVTNLTEEQKQRMEQLRAETAEDERKLTAELSRVRTRPTAISLVEMATMARERVNGERDTVDERIEMMKLAAEILVECADYLRCKTALKIMGILNPSQNVKFLLAVTQLQRRVRNWRMEREAESSTDNSRH* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0069 237 Coils Coil 112 136 - -
Vvi13g0069 237 ProSiteProfiles DOG1 domain profile. 12 229 IPR025422 GO:0006351|GO:0043565
Vvi13g0069 237 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 14 233 - -
Vvi13g0069 237 Pfam Seed dormancy control 27 105 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0069 Vvi-Chr13 643652 644365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0069 7 220 Calmodulin-binding Proteins AT1G22070 29.224 7.57e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0069 - - vvi:100267321 451.825