Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0037 ATGGACTGGTCTCTGGCCGTTACCATCGGTGCGGCTCTCCTCGCCATCTTCTTCTTGTTCCTGCGCCTCACTCGCCCCAGGGGCCACCGCCTGCCTCCGGGCAACCTGGGGCTCCCCCTGGTGGGCGAGACTCTGCAGCTCATCTCCGCCTACAAGTCGGCCAACCCTGAACCCTTCATCGACGAGAGGGTGACTCGGTACGGGCCCTTGTTCACCACCCATGTGTTCGGCGAGCCCACGGTGTTCTCGGCGGACCCGGAGACGAATCGGTACATATTGCAGAACGAGGGGAAGCTGTTCGAGTGCAGCTACCCTGGCTCCATCTCCAACTTGCTTGGAAGGCATTCCCTGTTGTTAATGAAGGGTAATCTCCACAAAAAAATGCATTCCCTCACCATGAGTTTCGGTAATTCTTCCATCATCAAGGACCACTTGCTGCTCGACATCGACCGCTTGATCCGCTTCAACATGGACTCATGGACCAGCCGGATCTTACTTATGGAAGAGGCCAAGAAGATAACATTCGATTTGACAGTGAAGCAGCTGATGAGCTTTGATCCAGGGGAGTGGACTGAGTCTCTGAGAAAAGAATATGTGCTTGTGATTGAAGGCTTCTTTACCGTCCCTTTCCCTCTCTTCTCCGCCACCTACCGCAGAGCCATCCAAGCAAGGACGAAGGTAGCAGAGGCACTGAACTTGGTAGTGAGGGAAAGGAGGAAAGCCAAGGAAGAAGGAGAAGAGGAGAAGAAGAACGACATGCTGGCCGCCCTCCTCGACAGCGGCGATAACTTCTCCGACGAGCAGATCGTGGATTTCATCCTGGCCCTGCTGGTGGCTGGCTACGAGACCACCTCCACCATCATGACCCTCGCGATCAAGTTCCTCACAGAGACCCCTCTCGCCTTGGCTCAGCTCAGGGAGGAGCATGACGAGATTAGGGCAAGGATAAGTGACCCTAATGTTCTGGAATGGAGTGATTATAAATCCATGCCTTTCACTCAATGTGTTGTGAATGAGACTTTGAGGGTGGCAAACATAATAGGTGGGATTTTCAGGCGAGTAACCACTGACATCCATGTCAAAGGTTACACAATTCCTAAGGGATGGAAGGTGTTTGCATCATTTCGAGCTGTACACCTGGACCATGAATACTTCAAGGATGCTCGTACTTTTAATCCCTGGAGATGGCAGTTACAGAATAATTCTGGACCCACGGTTCCAGGGAGTGGTGTGAATGTGTTCACACCATTTGGAGGAGGGCCGCGCCTGTGCCCTGGCTATGAGCTTGCAAGGGTGGTGCTCTCGGTTTTCCTTCACCGCATGGTCACTCGATACAGCTGGGCTCCTGCAGAGGAGGATAAGTTGGTGTTCTTTCCAACCACTAGGACTCAGAAGCGATACCCCATCAATGTGGAGAGGCGAAAAGTGTCATCCGCCGCAGAAAAAGGTGAGGGATGA 1458 0.5316 MDWSLAVTIGAALLAIFFLFLRLTRPRGHRLPPGNLGLPLVGETLQLISAYKSANPEPFIDERVTRYGPLFTTHVFGEPTVFSADPETNRYILQNEGKLFECSYPGSISNLLGRHSLLLMKGNLHKKMHSLTMSFGNSSIIKDHLLLDIDRLIRFNMDSWTSRILLMEEAKKITFDLTVKQLMSFDPGEWTESLRKEYVLVIEGFFTVPFPLFSATYRRAIQARTKVAEALNLVVRERRKAKEEGEEEKKNDMLAALLDSGDNFSDEQIVDFILALLVAGYETTSTIMTLAIKFLTETPLALAQLREEHDEIRARISDPNVLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRVTTDIHVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQLQNNSGPTVPGSGVNVFTPFGGGPRLCPGYELARVVLSVFLHRMVTRYSWAPAEEDKLVFFPTTRTQKRYPINVERRKVSSAAEKGEG* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0037 485 Pfam Cytochrome P450 32 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 Gene3D Cytochrome P450 23 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 CDD CYP90-like 63 473 - -
Vvi13g0037 485 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g0037 485 FunFam Cytochrome P450 90A1 21 474 - -
Vvi13g0037 485 PANTHER CYTOCHROME P450 26 30 455 - -
Vvi13g0037 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vvi13g0037 485 SUPERFAMILY Cytochrome P450 25 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0037 Vvi-Chr13 360424 363684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0037 120 478 Cytochrome P450 AT5G05690 78.273 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0037 K09588 - vvi:100258692 899.812